RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 TRAV4A0A0B4J268 109 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 IGHV1-58A0A0C4DH39 117 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 K7EQD1 137 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 NDUFA7O95182 113 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 APOMO95445 188 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 IGLV1-51P01701 117 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 WFDC2Q14508 124 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 RNASE13Q5GAN3 156 aaKnown RBP3.87□□□□□ -1.79
GPHN-213ENST00000556501 XP32Q5T750 250 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 HIST2H2BCQ6DN03 193 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 ATP6V0E2Q8NHE4 81 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 VSIG2Q96IQ7 327 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 LITAFQ99732 161 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 CELSR1Q9NYQ6 3014 aa3.87□□□□□ -1.79
GPHN-213ENST00000556501 ACANP16112 2415 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3OR16-12A0A075B7B8 117 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-38A0A0C4DH36 116 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 LOC107984156A0A0G2JMH3 177 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 A4D1N5 150 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 TIMM17BO60830 172 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 GIG44P09565 113 aaPredicted RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 TIRAPP58753 221 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 HILS1P60008 231 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 RPL36AP83881 106 aaKnown RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 DAZ2Q13117 558 aaKnown RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 MIAQ16674 131 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 Q6ZTI0 123 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 FAM19A3Q7Z5A8 133 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 SBSPONQ8IVN8 264 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 ARL17AQ8IVW1 177 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 RPL36ALQ969Q0 106 aaKnown RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 C16orf74Q96GX8 76 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 GEMIN7Q9H840 131 aaKnown RBP3.86□□□□□ -1.79
GPHN-213ENST00000556501 C19orf73Q9NVV2 129 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 NDUFA12Q9UI09 145 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 CSMD2Q7Z408 3487 aa3.86□□□□□ -1.79
GPHN-213ENST00000556501 SVEP1Q4LDE5 3571 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 MAST4O15021 2626 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 IGLV5-39A0A0G2JS06 123 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 PLAC8L1A1L4L8 177 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 J3QR89 54 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 NDUFA1O15239 70 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 CIDEAO60543 219 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 TCL1BO95988 128 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 PSMB2P49721 201 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 HERVK_113P63121 156 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 SMAGPQ0VAQ4 97 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 ETDBQ3ZM63 59 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 SH2D6Q7Z4S9 175 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 DAZ4Q86SG3 579 aaKnown RBP3.85□□□□□ -1.79
GPHN-213ENST00000556501 MUSTN1Q8IVN3 82 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 ZNF418Q8TF45 676 aaPredicted RBP3.85□□□□□ -1.79
GPHN-213ENST00000556501 RNF183Q96D59 192 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 C1QTNF4Q9BXJ3 329 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 DAZ3Q9NR90 486 aaKnown RBP3.85□□□□□ -1.79
GPHN-213ENST00000556501 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
GPHN-213ENST00000556501 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
GPHN-213ENST00000556501 NSD1Q96L73 2696 aaPredicted RBP3.85□□□□□ -1.79
GPHN-213ENST00000556501 MTORP42345 2549 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 M0QXV9 152 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 IFITM1P13164 125 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 DGAT2L7PQ6IED9 249 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 NTM-AS1Q6ZSK4 140 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 MTURNQ8N3F0 131 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 OVOL2Q9BRP0 275 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 WFDC10AQ9H1F0 79 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 NOP10Q9NPE3 64 aaKnown RBP3.84□□□□□ -1.79
GPHN-213ENST00000556501 CDKN2A-AS1Q9UH64 79 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 ERG28Q9UKR5 140 aa3.84□□□□□ -1.79
GPHN-213ENST00000556501 JMJD1CQ15652 2540 aa3.84□□□□□ -1.8
GPHN-213ENST00000556501 TRBV6-4A0A1B0GX49 114 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 H7C423 109 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 GYPEP15421 78 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 RPL35AP18077 110 aaKnown RBP3.83□□□□□ -1.8
GPHN-213ENST00000556501 GAGE4Q13068 117 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 GAGE5Q13069 117 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 ADAMTSL4-AS1Q5T5F5 129 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 LINC00242Q5T6M2 205 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 SFTA2Q6UW10 78 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 TEN1Q86WV5 123 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
GPHN-213ENST00000556501 PPDPFLQ8WWR9 84 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 SPATA25Q9BR10 227 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
GPHN-213ENST00000556501 NBPF19A0A087WUL8 3843 aa3.82□□□□□ -1.8
GPHN-213ENST00000556501 TRGV2A0A075B6R0 118 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms