RNA–Protein interactions for RNA: ENST00000556262.5

SDR39U1-218, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,960 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-218ENST00000556262 TRBV7-3A0A075B6L6 115 aa13.23□□□□□ -0.29
SDR39U1-218ENST00000556262 IGHV4-28A0A0C4DH34 117 aa13.23□□□□□ -0.29
SDR39U1-218ENST00000556262 HIST1H4GQ99525 98 aa13.23□□□□□ -0.29
SDR39U1-218ENST00000556262 MDFIQ99750 246 aa13.23□□□□□ -0.29
SDR39U1-218ENST00000556262 CIDEAO60543 219 aa13.22□□□□□ -0.29
SDR39U1-218ENST00000556262 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
SDR39U1-218ENST00000556262 RNF183Q96D59 192 aa13.22□□□□□ -0.29
SDR39U1-218ENST00000556262 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 C11orf86A6NJI1 115 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 C20orf203Q8NBC4 194 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 FHL2Q14192 279 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 Q8NAQ8 132 aa13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 NHP2Q9NX24 153 aaKnown RBP13.21□□□□□ -0.29
SDR39U1-218ENST00000556262 MGAM2Q2M2H8 2515 aa13.21□□□□□ -0.3
SDR39U1-218ENST00000556262 LOC100131303A0A0U1RQF7 123 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 GAGE4Q13068 117 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 GAGE5Q13069 117 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 A0A1B0GWB2 263 aa13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 RPL36AP83881 106 aaKnown RBP13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 RPL36ALQ969Q0 106 aaKnown RBP13.2□□□□□ -0.3
SDR39U1-218ENST00000556262 ZNF815PA8K554 130 aa13.19□□□□□ -0.3
SDR39U1-218ENST00000556262 NFE4Q86UQ8 179 aa13.19□□□□□ -0.3
SDR39U1-218ENST00000556262 OPRPNQ99935 248 aaPredicted RBP13.19□□□□□ -0.3
SDR39U1-218ENST00000556262 TMEM238LA0A1B0GVL6 79 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 TRBV6-4A0A1B0GX49 114 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 A6NJY4 79 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 MIFP14174 115 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 COTL1Q14019 142 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 CHCHD7Q9BUK0 85 aa13.18□□□□□ -0.3
SDR39U1-218ENST00000556262 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 A8MZ25 164 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 K7ERJ3 54 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 UBE2D3P61077 147 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 UBE2D2P62837 147 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 RETNQ9HD89 108 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 CELA1Q9UNI1 258 aa13.17□□□□□ -0.3
SDR39U1-218ENST00000556262 PRB2P02812 416 aaPredicted RBP13.16□□□□□ -0.3
SDR39U1-218ENST00000556262 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.16□□□□□ -0.3
SDR39U1-218ENST00000556262 IGKV2-29A2NJV5 120 aaPredicted RBP13.16□□□□□ -0.3
SDR39U1-218ENST00000556262 IGLL5B9A064 214 aa13.16□□□□□ -0.3
SDR39U1-218ENST00000556262 CRYBA4P53673 196 aa13.16□□□□□ -0.3
SDR39U1-218ENST00000556262 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
SDR39U1-218ENST00000556262 SCGB1D4Q6XE38 83 aa13.15□□□□□ -0.3
SDR39U1-218ENST00000556262 PYGO1Q9Y3Y4 419 aa13.15□□□□□ -0.3
SDR39U1-218ENST00000556262 TENM3Q9P273 2699 aa13.15□□□□□ -0.31
SDR39U1-218ENST00000556262 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
SDR39U1-218ENST00000556262 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
SDR39U1-218ENST00000556262 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
SDR39U1-218ENST00000556262 NTM-AS1Q6ZSK4 140 aa13.13□□□□□ -0.31
SDR39U1-218ENST00000556262 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
SDR39U1-218ENST00000556262 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
SDR39U1-218ENST00000556262 DAD1P61803 113 aa13.12□□□□□ -0.31
SDR39U1-218ENST00000556262 FAM104AQ969W3 186 aa13.12□□□□□ -0.31
SDR39U1-218ENST00000556262 UBE2D4Q9Y2X8 147 aa13.11□□□□□ -0.31
SDR39U1-218ENST00000556262 LEPROTO15243 131 aa13.1□□□□□ -0.31
SDR39U1-218ENST00000556262 RNASE13Q5GAN3 156 aaKnown RBP13.1□□□□□ -0.31
SDR39U1-218ENST00000556262 A0A0J9YY99 117 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 SPART-AS1P0CW21 52 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 SRSF9Q13242 221 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■□□□ 12
SDR39U1-218ENST00000556262 PLEKHB2Q96CS7 222 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 VCX2Q9H322 139 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 TMEM223A0PJW6 202 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 J3QQQ9 107 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 GYPEP15421 78 aa13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 LGALS3P17931 250 aaKnown RBP13.09□□□□□ -0.31
SDR39U1-218ENST00000556262 LINC00694P0DN24 101 aa13.08□□□□□ -0.32
SDR39U1-218ENST00000556262 UBE2D1P51668 147 aa13.08□□□□□ -0.32
SDR39U1-218ENST00000556262 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
SDR39U1-218ENST00000556262 F8W1H4 67 aa13.07□□□□□ -0.32
SDR39U1-218ENST00000556262 AMELXQ99217 191 aa13.07□□□□□ -0.32
SDR39U1-218ENST00000556262 SPANXA1Q9NS26 97 aa13.07□□□□□ -0.32
SDR39U1-218ENST00000556262 ZNF22P17026 224 aaPredicted RBP13.06□□□□□ -0.32
SDR39U1-218ENST00000556262 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 Q6ZUT4 128 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 GTSF1LQ9H1H1 148 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 K7EIL1 84 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 PAX4O43316 350 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 ATP5G1P05496 136 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 HTN3P15516 51 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
SDR39U1-218ENST00000556262 MRPS36P82909 103 aaKnown RBP13.04□□□□□ -0.32
SDR39U1-218ENST00000556262 LYRM7Q5U5X0 104 aa13.04□□□□□ -0.32
SDR39U1-218ENST00000556262 VSIG2Q96IQ7 327 aa13.04□□□□□ -0.32
SDR39U1-218ENST00000556262 A0A096LPF7 62 aa13.03□□□□□ -0.32
SDR39U1-218ENST00000556262 F5H768 121 aa13.03□□□□□ -0.32
SDR39U1-218ENST00000556262 RPL24P83731 157 aaKnown RBP13.03□□□□□ -0.32
SDR39U1-218ENST00000556262 TMEM243Q9BU79 118 aa13.03□□□□□ -0.32
SDR39U1-218ENST00000556262 TRAV26-1A0A087WT03 109 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 A0A0J9YXV3 536 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 TEX48A0A1B0GUV7 120 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 IGHV3-30P01768 117 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 IGHV3-30-5P0DP03 117 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.32
SDR39U1-218ENST00000556262 TRBV6-8A0A0A6YYG3 113 aa13.01□□□□□ -0.33
SDR39U1-218ENST00000556262 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms