RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 IBA57-AS1B1ANH7 110 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 P01737 135 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 SMR3BP02814 79 aaPredicted RBP4.49□□□□□ -1.69
PSEN1-216ENST00000556066 RNASE3P12724 160 aaKnown RBP4.49□□□□□ -1.69
PSEN1-216ENST00000556066 RPL13AP40429 203 aaKnown RBP4.49□□□□□ -1.69
PSEN1-216ENST00000556066 ASIPP42127 132 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 CRIP1P50238 77 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 XGP55808 180 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 HAMPP81172 84 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 RPL19P84098 196 aaKnown RBP4.49□□□□□ -1.69
PSEN1-216ENST00000556066 LINC01556Q5JQF7 62 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 ATP6V0E2Q8NHE4 81 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 TSKUQ8WUA8 353 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 PGLYRP4Q96LB8 373 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 GTSF1LQ9H1H1 148 aa4.49□□□□□ -1.69
PSEN1-216ENST00000556066 IGKV3D-20A0A0C4DH25 116 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 GAGE12JA6NER3 117 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 FABP5P3A8MUU1 101 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 HIGD1CA8MV81 97 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 A8MWL6 223 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 A8MWV9 139 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 H3BVH4 76 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 M0QXV9 152 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 SERF1AO75920 110 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 HLA-DQA1P01909 254 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 APCSP02743 223 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 MT-ND6P03923 174 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 INAFM2P0DMQ5 153 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 Q0VG73 95 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 GAGE1Q13065 139 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 GAGE4Q13068 117 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 GAGE5Q13069 117 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 LELP1Q5T871 98 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 Q5VSD8 79 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 JPT2Q9H910 190 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 ZFP30Q9Y2G7 519 aa4.48□□□□□ -1.69
PSEN1-216ENST00000556066 TMSB15BA0A087X1C1 80 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 A0A1B0GXF2 115 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 LRCOL1A6NCL2 159 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 SH2D1AO60880 128 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 IQCJQ1A5X6 159 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 FAM74A4Q5TZK3 123 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 PTH2Q96A98 100 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 TMEM18Q96B42 140 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 SAMD10Q9BYL1 202 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 GFRA4Q9GZZ7 299 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 Q9UF83 564 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 V9GYY9 64 aa4.47□□□□□ -1.69
PSEN1-216ENST00000556066 M0R381 172 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 LECT2O14960 151 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 ARMS2P0C7Q2 107 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 ESDP10768 282 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
PSEN1-216ENST00000556066 FAM162BQ5T6X4 162 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 RASL11AQ6T310 242 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 ZFP2Q6ZN57 461 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 DAZ4Q86SG3 579 aaKnown RBP4.46□□□□□ -1.7
PSEN1-216ENST00000556066 C14orf178Q8N769 122 aaPredicted RBP4.46□□□□□ -1.7
PSEN1-216ENST00000556066 Q8N814 137 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.7
PSEN1-216ENST00000556066 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 DAZ3Q9NR90 486 aaKnown RBP4.46□□□□□ -1.7
PSEN1-216ENST00000556066 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
PSEN1-216ENST00000556066 TRAV8-3A0A0A6YYJ7 113 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 FAM231BA6NCW3 169 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 LINC00587B1AMM8 73 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 RHODO00212 210 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 FOXA3P55318 350 aaPredicted RBP4.45□□□□□ -1.7
PSEN1-216ENST00000556066 HBBP68871 147 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 LAGE3Q14657 143 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 PIK3CD-AS1Q5SR53 167 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 COX8CQ7Z4L0 72 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 ATP5L2Q7Z4Y8 100 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 TMEM70Q9BUB7 260 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 PRO1933Q9H354 126 aa4.45□□□□□ -1.7
PSEN1-216ENST00000556066 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.44□□□□□ -1.7
PSEN1-216ENST00000556066 MUC21A0A0G2JKD1 596 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 MUC21A0A140T8X8 626 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 LINC00694P0DN24 101 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 RIGQ13278 110 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 WFDC2Q14508 124 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 DNLZQ5SXM8 178 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 UFSP1Q6NVU6 142 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 BAALCQ8WXS3 180 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
PSEN1-216ENST00000556066 IGKV2D-24A0A075B6R9 120 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 A0A087WX48 190 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 A0A1B0GUT8 65 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 TSPAN13O95857 204 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 RPL36AP83881 106 aaKnown RBP4.43□□□□□ -1.7
PSEN1-216ENST00000556066 NIT1Q86X76 327 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 GATD1Q8NB37 220 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
PSEN1-216ENST00000556066 UBE2WQ96B02 151 aa4.43□□□□□ -1.7
PSEN1-216ENST00000556066 DNAJC30Q96LL9 226 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms