RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TRAV25A0A0B4J276 109 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 C9JAW5 83 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 M0QXV9 152 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 RS1O15537 224 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 SLC25A20O43772 301 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 Q6ZSN1 163 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 SBSPONQ8IVN8 264 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 STHQ8IWL8 128 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 TMEM86BQ8N661 226 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 C11orf72Q8NBR9 251 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 CLUHP3Q96NS8 147 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 SPANXDQ9BXN6 97 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 TLN2Q9Y4G6 2542 aa5.08□□□□□ -1.6
TDP1-213ENST00000555880 TENM4Q6N022 2769 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 A0A1B0GV72 72 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 PRM2P04554 102 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 COX6CP09669 75 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 SPINK8P0C7L1 97 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 MIAQ16674 131 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 Q6ZUT4 128 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 ANKRD29Q8N6D5 301 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 FAM104AQ969W3 186 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 IGHV3-38A0A0C4DH36 116 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 TRBV30A0A0K0K1B3 111 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 TMEM262E9PQX1 116 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 CIDEAO60543 219 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 TIMM17BO60830 172 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 CIRBPQ14011 172 aaKnown RBP5.07□□□□□ -1.6
TDP1-213ENST00000555880 ZFAND6Q6FIF0 208 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 XCL2Q9UBD3 114 aa5.07□□□□□ -1.6
TDP1-213ENST00000555880 FASNP49327 2511 aaKnown RBP5.06□□□□□ -1.6
TDP1-213ENST00000555880 FBN2P35556 2912 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 IGHV3OR16-12A0A075B7B8 117 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 TRGV1A0A0A0MS02 117 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 IFITM1P13164 125 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 TIRAPP58753 221 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 COPS9Q8WXC6 57 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 RNF183Q96D59 192 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 LITAFQ99732 161 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 Q9UF83 564 aa5.06□□□□□ -1.6
TDP1-213ENST00000555880 HELZ2Q9BYK8 2649 aaKnown RBP5.06□□□□□ -1.6
TDP1-213ENST00000555880 HERVK_113P63121 156 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 RPL36AP83881 106 aaKnown RBP5.05□□□□□ -1.6
TDP1-213ENST00000555880 LINC01620Q4KN68 170 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 HIST2H2BCQ6DN03 193 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 RPL36ALQ969Q0 106 aaKnown RBP5.05□□□□□ -1.6
TDP1-213ENST00000555880 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 ICOSQ9Y6W8 199 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 WNK1Q9H4A3 2382 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 ITPR3Q14573 2671 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 IGLV5-45A0A087WSX0 123 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 TRBV10-1A0A0K0K1A3 114 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 NDUFA1O15239 70 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 TRIAP1O43715 76 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
TDP1-213ENST00000555880 ODF3L2Q3SX64 289 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 ADAMTSL4-AS1Q5T5F5 129 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 DAZ4Q86SG3 579 aaKnown RBP5.05□□□□□ -1.6
TDP1-213ENST00000555880 WFDC11Q8NEX6 87 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 DAZ3Q9NR90 486 aaKnown RBP5.05□□□□□ -1.6
TDP1-213ENST00000555880 CDKN2A-AS1Q9UH64 79 aa5.05□□□□□ -1.6
TDP1-213ENST00000555880 A0A1W2PRX2 142 aa5.04□□□□□ -1.6
TDP1-213ENST00000555880 K7EQD1 137 aa5.04□□□□□ -1.6
TDP1-213ENST00000555880 CCL24O00175 119 aa5.04□□□□□ -1.6
TDP1-213ENST00000555880 CMC4P56277 68 aaPredicted RBP5.04□□□□□ -1.6
TDP1-213ENST00000555880 NPC2P61916 151 aa5.04□□□□□ -1.6
TDP1-213ENST00000555880 Q6ZSV7 163 aa5.04□□□□□ -1.6
TDP1-213ENST00000555880 CSMD2Q7Z408 3487 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 TRAV4A0A0B4J268 109 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 TRBV10-2A0A0K0K1G8 114 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 DNAJC9-AS1A6NH13 148 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 A8MZ25 164 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 CKS1BP61024 79 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 TMEM101Q96IK0 257 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 SONP18583 2426 aaKnown RBP5.03□□□□□ -1.6
TDP1-213ENST00000555880 UBE2L6O14933 153 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 MT-ATP8P03928 68 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 RPL13AP40429 203 aaKnown RBP5.03□□□□□ -1.6
TDP1-213ENST00000555880 XGP55808 180 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 FHL3Q13643 280 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 C2orf82Q6UX34 121 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 C11orf44Q8N8P7 122 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 IL17DQ8TAD2 202 aa5.03□□□□□ -1.6
TDP1-213ENST00000555880 CSDC2Q9Y534 153 aaKnown RBP5.03□□□□□ -1.6
TDP1-213ENST00000555880 FLNAP21333 2647 aaKnown RBP5.02□□□□□ -1.61
TDP1-213ENST00000555880 APCP25054 2843 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 SETD2Q9BYW2 2564 aaPredicted RBP5.02□□□□□ -1.61
TDP1-213ENST00000555880 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 LINC00242Q5T6M2 205 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 Q6ZTI0 123 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 NTN5Q8WTR8 489 aaPredicted RBP5.02□□□□□ -1.61
TDP1-213ENST00000555880 UBE2WQ96B02 151 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 LINC01600Q96MT4 127 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 Q9H8V8 135 aa5.02□□□□□ -1.61
TDP1-213ENST00000555880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.02□□□□□ -1.61
TDP1-213ENST00000555880 NOTCH3Q9UM47 2321 aa5.01□□□□□ -1.61
TDP1-213ENST00000555880 TRAV13-1A0A0B4J241 112 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms