RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 FBXL19-AS1Q494R0 122 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 IGF2RP11717 2491 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 ATMQ13315 3056 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 ABCA4P78363 2273 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1BA6NDE4 496 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1EA6NEQ0 496 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1DP0C7P1 496 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1A1P0DJD3 496 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1CP0DJD4 496 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 RBMY1FQ15415 496 aaKnown RBP7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 ECSCRQ19T08 205 aa7.58□□□□□ -1.2
EFCAB11-208ENST00000555872 TRAV12-3A0A0B4J271 114 aa7.57□□□□□ -1.2
EFCAB11-208ENST00000555872 IGKV3D-7A0A0C4DH55 119 aa7.57□□□□□ -1.2
EFCAB11-208ENST00000555872 ADAMTSL4-AS1Q5T5F5 129 aa7.57□□□□□ -1.2
EFCAB11-208ENST00000555872 C9orf47Q6ZRZ4 202 aa7.57□□□□□ -1.2
EFCAB11-208ENST00000555872 DYNLRB1Q9NP97 96 aa7.57□□□□□ -1.2
EFCAB11-208ENST00000555872 A0A0J9YXV3 536 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 SDHAF1A6NFY7 115 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 VCYO14598 125 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 GNRH2O43555 120 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 POLR2KP53803 58 aaKnown RBP7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 NDPQ00604 133 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 LITAFQ99732 161 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 RNF5Q99942 180 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 F5H697 171 aa7.56□□□□□ -1.2
EFCAB11-208ENST00000555872 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
EFCAB11-208ENST00000555872 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
EFCAB11-208ENST00000555872 NACAE9PAV3 2078 aa7.55□□□□□ -1.2
EFCAB11-208ENST00000555872 A0A0J9YX75 114 aa7.55□□□□□ -1.2
EFCAB11-208ENST00000555872 IGHV3-30-3P0DP02 117 aa7.55□□□□□ -1.2
EFCAB11-208ENST00000555872 TLN1Q9Y490 2541 aaKnown RBP7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 PIEZO2Q9H5I5 2752 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 A0A087WZ39 114 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 TMEM256-PLSCR3K7ERE1 68 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 CLPSL1A2RUU4 121 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 F6UB75 175 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 DEFB1P60022 68 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 SUMO4Q6EEV6 95 aa7.54□□□□□ -1.2
EFCAB11-208ENST00000555872 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 LINC00315P59091 139 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 TMEM61Q8N0U2 210 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 LINC00588Q9Y4M8 146 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 MUC4Q99102 2169 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 A0A087WW49 117 aa7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 ZNF73O43830 326 aaPredicted RBP7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
EFCAB11-208ENST00000555872 RNASE4P34096 147 aaKnown RBP7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 DAND5Q8N907 189 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 KAAG1Q9UBP8 84 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 NCOR2Q9Y618 2525 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 MIAQ16674 131 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 C15orf32Q32M92 178 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 VMO1Q7Z5L0 202 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
EFCAB11-208ENST00000555872 TRBV27A0A0K0K1C4 114 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 F8WEM9 126 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 RELNP78509 3460 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 M0R1W7 72 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 IGHV1-69P01742 117 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 NPBQ8NG41 125 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 PCNX1Q96RV3 2341 aa7.51□□□□□ -1.21
EFCAB11-208ENST00000555872 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 BSPH1Q075Z2 132 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 IGHV3OR16-10A0A075B7F0 116 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 Q6JHZ5 121 aa7.5□□□□□ -1.21
EFCAB11-208ENST00000555872 LYNX1G3V0Z9 82 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 LYNX1P0DP58 116 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 OVOL2Q9BRP0 275 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 DPM3Q9P2X0 92 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 CHD8Q9HCK8 2581 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 BAALC-AS2P0C853 105 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 RPL11P62913 178 aaKnown RBP7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 Q9H8V8 135 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 LENEPQ9Y5L5 61 aa7.49□□□□□ -1.21
EFCAB11-208ENST00000555872 IGLV4-3A0A075B6K6 122 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 A8MUN3 132 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 NXPH4O95158 308 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 RMI2Q96E14 147 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 A8MU10 97 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 MED14OSP0DP75 135 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 SNURFQ9Y675 71 aa7.48□□□□□ -1.21
EFCAB11-208ENST00000555872 COX7A2LO14548 114 aa7.47□□□□□ -1.21
EFCAB11-208ENST00000555872 RNASE13Q5GAN3 156 aaKnown RBP7.47□□□□□ -1.21
EFCAB11-208ENST00000555872 C20orf203Q8NBC4 194 aa7.47□□□□□ -1.21
EFCAB11-208ENST00000555872 CHD6Q8TD26 2715 aa7.47□□□□□ -1.21
EFCAB11-208ENST00000555872 ITPR1Q14643 2758 aa7.47□□□□□ -1.21
EFCAB11-208ENST00000555872 ZFHX3Q15911 3703 aa7.46□□□□□ -1.22
EFCAB11-208ENST00000555872 TRAV23DV6A0A075B6W5 121 aa7.46□□□□□ -1.22
EFCAB11-208ENST00000555872 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms