RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 IGKV3D-7A0A0C4DH55 119 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 IGKV3OR2-268A0A0C4DH90 116 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 FAM223BA6NKX1 122 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 F8WEM9 126 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 LINC00304Q8N9R0 145 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 LINC01600Q96MT4 127 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 WFDC10AQ9H1F0 79 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 PROK2Q9HC23 129 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 NUP188Q5SRE5 1749 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 FREM1Q5H8C1 2179 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 CCDC180Q9P1Z9 1646 aa1.48□□□□□ -2.17
CASC1-208ENST00000555240 DIP2CQ9Y2E4 1556 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 CUX1P39880 1505 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 TRBV25-1A0A075B6N4 114 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 TMEM14DPA8MWL7 114 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 JMJD7-PLA2G4BH0Y9G9 81 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 HMGN4O00479 90 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 IGLV6-57P01721 117 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 PDE6GP18545 87 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 C10orf55Q5SWW7 151 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 DYNLRB1Q9NP97 96 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 PSENENQ9NZ42 101 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 PREX1Q8TCU6 1659 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 UBR3Q6ZT12 1888 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 MDC1Q14676 2089 aaKnown RBP1.47□□□□□ -2.17
CASC1-208ENST00000555240 BLMP54132 1417 aaPredicted RBP1.47□□□□□ -2.17
CASC1-208ENST00000555240 KIAA0100Q14667 2235 aaKnown RBP1.47□□□□□ -2.17
CASC1-208ENST00000555240 ARFGEF3Q5TH69 2177 aa1.47□□□□□ -2.17
CASC1-208ENST00000555240 BRWD1Q9NSI6 2320 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 CRYBG1Q9Y4K1 1723 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 KCPQ6ZWJ8 1503 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 EHBP1L1Q8N3D4 1523 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 DUOX2Q9NRD8 1548 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 MRC1P22897 1456 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 IQCF6A8MYZ5 107 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 H3BRN7 92 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 PPP1R17O96001 155 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 IGHV3-30P01768 117 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 COX6CP09669 75 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 IGHV3-30-5P0DP03 117 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 IL9P15248 144 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 SSBP1Q04837 148 aaKnown RBP1.46□□□□□ -2.18
CASC1-208ENST00000555240 SPAG11BQ08648 103 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 HMGN3Q15651 99 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 TMEM170BQ5T4T1 132 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 SPAG11AQ6PDA7 123 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 LINC00643Q86TS7 51 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 C4orf3Q8WVX3 66 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 TVP23CQ96ET8 276 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 TMEM14BQ9NUH8 114 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 LRRC37A3O60309 1634 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 PKD1L3Q7Z443 1732 aa1.46□□□□□ -2.18
CASC1-208ENST00000555240 EFCAB5A4FU69 1503 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ABCC1P33527 1531 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 SHPRHQ149N8 1683 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ZNF831Q5JPB2 1677 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 IQSEC2Q5JU85 1478 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ABCA9Q8IUA7 1624 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 COL14A1Q05707 1796 aaKnown RBP1.45□□□□□ -2.18
CASC1-208ENST00000555240 NBDYA0A0U1RRE5 68 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 C7orf77A4D0Y5 90 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 UMAD1C9J7I0 102 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 DNAL4O96015 105 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 CCL3L1P16619 93 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 SPINT3P49223 89 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 TTTY12Q9BZ98 90 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 KLK9Q9UKQ9 250 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 LENEPQ9Y5L5 61 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ARL2-SNX15V9GYD0 113 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 XRN1Q8IZH2 1706 aaKnown RBP1.45□□□□□ -2.18
CASC1-208ENST00000555240 LMTK2Q8IWU2 1503 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 PLCH1Q4KWH8 1693 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ITSN2Q9NZM3 1697 aa1.45□□□□□ -2.18
CASC1-208ENST00000555240 ALPK2Q86TB3 2170 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 DOCK10Q96BY6 2186 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 TIAM2Q8IVF5 1701 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 PARP4Q9UKK3 1724 aaKnown RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 EEA1Q15075 1411 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 ZNF815PA8K554 130 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 HIGD1CA8MV81 97 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 BCE1O60756 84 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 HMGN2P05204 90 aaKnown RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 ACYP1P07311 99 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 SMIM11AP58511 58 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 ELOF1P60002 83 aaKnown RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 RPL37AP61513 92 aaKnown RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 GNGT1P63211 74 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 XAF1Q6GPH4 301 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 Q6ZRN7 208 aaPredicted RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 FDCSPQ8NFU4 85 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 COX7B2Q8TF08 81 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 PRR15LQ9BU68 103 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 TSC2P49815 1807 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 FN1P02751 2386 aaKnown RBP1.44□□□□□ -2.18
CASC1-208ENST00000555240 ABCC2Q92887 1545 aa1.44□□□□□ -2.18
CASC1-208ENST00000555240 ABCA4P78363 2273 aa1.43□□□□□ -2.18
CASC1-208ENST00000555240 IFT172Q9UG01 1749 aa1.43□□□□□ -2.18
CASC1-208ENST00000555240 MROH2AA6NES4 1674 aa1.43□□□□□ -2.18
CASC1-208ENST00000555240 WIZO95785 1651 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms