RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TOMM6Q96B49 74 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 SPANXA1Q9NS26 97 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
SYNE2-215ENST00000554997 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
SYNE2-215ENST00000554997 ANGP03950 147 aaKnown RBP6.88□□□□□ -1.31
SYNE2-215ENST00000554997 NPSP0C0P6 89 aa6.88□□□□□ -1.31
SYNE2-215ENST00000554997 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
SYNE2-215ENST00000554997 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
SYNE2-215ENST00000554997 M0R2N4 97 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 NUPR1O60356 82 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 SERF1AO75920 110 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
SYNE2-215ENST00000554997 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 ERASQ7Z444 233 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
SYNE2-215ENST00000554997 A0A096LNJ9 63 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 HSBP1O75506 76 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 HBDP02042 147 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 NDUFA6P56556 154 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 LINC00310P59036 64 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 REG3AQ06141 175 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 COA6Q5JTJ3 125 aaKnown RBP6.86□□□□□ -1.31
SYNE2-215ENST00000554997 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 TIMM17AQ99595 171 aa6.86□□□□□ -1.31
SYNE2-215ENST00000554997 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 PMCHL1Q16048 86 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 PAPPA-AS1Q5QFB9 102 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 UBE2WQ96B02 151 aa6.85□□□□□ -1.31
SYNE2-215ENST00000554997 OPRPNQ99935 248 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-215ENST00000554997 IGLV4-3A0A075B6K6 122 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.84□□□□□ -1.31
SYNE2-215ENST00000554997 CCL25O15444 150 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 MIAQ16674 131 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 FAM19A2Q8N3H0 131 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 VCX2Q9H322 139 aa6.84□□□□□ -1.31
SYNE2-215ENST00000554997 ATP5LO75964 103 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 CRPP02741 224 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 Q6ZUT4 128 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 C6orf223Q8N319 242 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 RMI2Q96E14 147 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 AMELXQ99217 191 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 COX11Q9Y6N1 276 aa6.83□□□□□ -1.32
SYNE2-215ENST00000554997 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 SS18Q15532 418 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 Q6ZN92 141 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 Q9HAA7 133 aa6.82□□□□□ -1.32
SYNE2-215ENST00000554997 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
SYNE2-215ENST00000554997 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
SYNE2-215ENST00000554997 S100A6P06703 90 aa6.81□□□□□ -1.32
SYNE2-215ENST00000554997 RNASE13Q5GAN3 156 aaKnown RBP6.81□□□□□ -1.32
SYNE2-215ENST00000554997 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
SYNE2-215ENST00000554997 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
SYNE2-215ENST00000554997 IGKV2D-24A0A075B6R9 120 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 TRAV13-1A0A0B4J241 112 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 PMVKQ15126 192 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 Q6ZRN7 208 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-215ENST00000554997 LINC00173Q6ZV60 143 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 BAALCQ8WXS3 180 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 IFI27L1Q96BM0 104 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 PACRGQ96M98 296 aaPredicted RBP6.8□□□□□ -1.32
SYNE2-215ENST00000554997 C2orf88Q9BSF0 95 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 HSPB8Q9UJY1 196 aa6.8□□□□□ -1.32
SYNE2-215ENST00000554997 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 IFITM10A6NMD0 228 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 PRSS1P07477 247 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 FABP4P15090 132 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 UBE2D1P51668 147 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
SYNE2-215ENST00000554997 CHCHD10Q8WYQ3 142 aaPredicted RBP6.79□□□□□ -1.32
SYNE2-215ENST00000554997 RTL8CO15255 209 aa6.78□□□□□ -1.32
SYNE2-215ENST00000554997 LINC00242Q5T6M2 205 aa6.78□□□□□ -1.32
SYNE2-215ENST00000554997 CD164L2Q6UWJ8 174 aa6.78□□□□□ -1.32
SYNE2-215ENST00000554997 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
SYNE2-215ENST00000554997 TRAV12-1A0A0B4J245 112 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 GAGE12HA6NDE8 117 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 PSCAO43653 123 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 XCL1P47992 114 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
SYNE2-215ENST00000554997 SEC11AP67812 179 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 FOXI1Q12951 378 aa6.77□□□□□ -1.33
SYNE2-215ENST00000554997 EPPK1P58107 5090 aaKnown RBP6.77□□□□□ -1.33
SYNE2-215ENST00000554997 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms