RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.65□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV1-1A0A0B4J248 108 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 LOC100130705A0A1B0GUX0 176 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 IFITM5A6NNB3 132 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 HSBP1L1C9JCN9 74 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 GPR31O00270 319 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 SLC25A20O43772 301 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 NDUFS6O75380 124 aaKnown RBP0.65□□□□□ -2.3
PRPF39-208ENST00000554785 TCRBP04435 133 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 OR4E1P0C645 316 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 PYYP10082 97 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 BCL2P10415 239 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 PIGPP57054 158 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 KRTAP12-3P60328 96 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 YPEL3P61236 119 aaPredicted RBP0.65□□□□□ -2.3
PRPF39-208ENST00000554785 FABP5Q01469 135 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 TMED1Q13445 227 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 SURF2Q15527 256 aaPredicted RBP0.65□□□□□ -2.3
PRPF39-208ENST00000554785 RHOHQ15669 191 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 ENHOQ6UWT2 76 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 LINC00305Q7Z4B0 112 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 FAM19A5Q7Z5A7 132 aaPredicted RBP0.65□□□□□ -2.3
PRPF39-208ENST00000554785 SNX29P2Q8IUI4 249 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 LHFPL5Q8TAF8 219 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 HYLS1Q96M11 299 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 PRADC1Q9BSG0 188 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 AP4S1Q9Y587 144 aa0.65□□□□□ -2.3
PRPF39-208ENST00000554785 TRAV4A0A0B4J268 109 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 MUC21A0A140T8X8 626 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 C3orf85A0A1B0GTC6 90 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 TCRBV3S1A0A5B6 114 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 IRGMA1A4Y4 181 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 FAM24AA6NFZ4 105 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 B4DEV8 164 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 H3BQ15 152 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 H3BRN7 92 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 K7EP13 123 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 IFNA7P01567 189 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 TYMSP04818 313 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 UCHL1P09936 223 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 CTXN2P0C2S0 81 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 SLC25A4P12235 298 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 RPL7P18124 248 aaKnown RBP0.65□□□□□ -2.31
PRPF39-208ENST00000554785 S100GP29377 79 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 KRTAP12-4P60329 112 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 GNGT1P63211 74 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 KLK9Q2XQG4 91 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 SPANXN5Q5MJ07 72 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 SPATA31B1PQ5VZV4 182 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 LPCAT3Q6P1A2 487 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 Q6Q795 121 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 TMEM91Q6ZNR0 172 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 SELENOHQ8IZQ5 122 aaKnown RBP0.65□□□□□ -2.31
PRPF39-208ENST00000554785 OR5H6Q8NGV6 325 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 DYNC2LI1Q8TCX1 351 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 RNASEH2CQ8TDP1 164 aaKnown RBP0.65□□□□□ -2.31
PRPF39-208ENST00000554785 C2orf50Q96LR7 162 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 FAM210AQ96ND0 272 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 NPVFQ9HCQ7 196 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 COPZ2Q9P299 210 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 HIGD1AQ9Y241 93 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 MDN1Q9NU22 5596 aa0.65□□□□□ -2.31
PRPF39-208ENST00000554785 EFCAB10A6NFE3 127 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 A8MTW9 85 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 M0R036 132 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 M0R381 172 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 ARL6IP5O75915 188 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 MGST1P10620 155 aaKnown RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SULT1A2P50226 295 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 GABARAPL2P60520 117 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2BP63146 152 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SS18Q15532 418 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 ZNF56Q15929 161 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 KRTAP20-1Q3LI63 56 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 TDRG1Q3Y452 100 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 C9orf116Q5BN46 136 aaPredicted RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 TMEM78Q5T7P6 136 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 CFAP126Q5VTH2 177 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 LCN15Q6UWW0 184 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 IZUMO2Q6UXV1 221 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 ZFAND2AQ8N6M9 145 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 OR13C8Q8NGS7 320 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SUN5Q8TC36 379 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 AGPAT4-IT1Q9H0P7 198 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 FKBP14Q9NWM8 211 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 PLAC8Q9NZF1 115 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 UBE2D4Q9Y2X8 147 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 TMSB15BA0A087X1C1 80 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 IGSF23A1L1A6 192 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 H3BVH4 76 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 M0R2P5 195 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SSSCA1O60232 199 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 HYPMO75409 117 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SLC25A5P05141 298 aaKnown RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 METTL15P1P0C7V9 234 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 PVALBP20472 110 aaPredicted RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 S100A4P26447 101 aaKnown RBP0.64□□□□□ -2.31
PRPF39-208ENST00000554785 XCL1P47992 114 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 SPCS3P61009 180 aa0.64□□□□□ -2.31
PRPF39-208ENST00000554785 LSM3P62310 102 aaKnown RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms