RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 STPG4Q8N801 248 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 BAALCQ8WXS3 180 aa8.63□□□□□ -1.03
SHMT2-214ENST00000554604 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
SHMT2-214ENST00000554604 RTL8CO15255 209 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 CHTOPQ9Y3Y2 248 aaKnown RBP8.62□□□□□ -1.03
SHMT2-214ENST00000554604 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 TNFRSF18Q9Y5U5 241 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
SHMT2-214ENST00000554604 H3BNG1 76 aa8.61□□□□□ -1.03
SHMT2-214ENST00000554604 SIVA1O15304 175 aa8.61□□□□□ -1.03
SHMT2-214ENST00000554604 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
SHMT2-214ENST00000554604 ZNRF2Q8NHG8 242 aa8.61□□□□□ -1.03
SHMT2-214ENST00000554604 DNAH2Q9P225 4427 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 IGHV3-73A0A0B4J1V6 119 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 TRAV4A0A0B4J268 109 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 NBDYA0A0U1RRE5 68 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 A0A1B0GV90 55 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 CIDEAO60543 219 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 PMVKQ15126 192 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 COL5A1-AS1Q5SY13 56 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 Q6ZSN1 163 aa8.6□□□□□ -1.03
SHMT2-214ENST00000554604 RPL39P62891 51 aaKnown RBP8.59□□□□□ -1.03
SHMT2-214ENST00000554604 BATFQ16520 125 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 PAPPA-AS1Q5QFB9 102 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 ZC2HC1BQ5TFG8 222 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 C2orf91Q6ZV80 131 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 OR4C5Q8NGB2 326 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
SHMT2-214ENST00000554604 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 PAX4O43316 350 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 NPSP0C0P6 89 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 NMUP48645 174 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 HINT1P49773 126 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-214ENST00000554604 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 Q9H8V8 135 aa8.58□□□□□ -1.04
SHMT2-214ENST00000554604 IGKV2D-26A0A0A0MRZ7 120 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 TRGV4A0A0C4DH28 118 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 ESRGQ1W209 222 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 PRO0255Q9UI72 69 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
SHMT2-214ENST00000554604 A0A096LPF7 62 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 CRYBA4P53673 196 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 MPV17L2Q567V2 206 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 TTC32Q5I0X7 151 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 C6orf223Q8N319 242 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
SHMT2-214ENST00000554604 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 K7EQD1 137 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 TMEM97Q5BJF2 176 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 BVES-AS1Q5T3Y7 98 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 ZNF479Q96JC4 524 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 UPK3BQ9BT76 320 aa8.55□□□□□ -1.04
SHMT2-214ENST00000554604 FAT2Q9NYQ8 4349 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 E9PLD3 99 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 COTL1Q14019 142 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 FHL2Q14192 279 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 MRPL23Q16540 153 aaKnown RBP8.54□□□□□ -1.04
SHMT2-214ENST00000554604 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 Q9UF83 564 aa8.54□□□□□ -1.04
SHMT2-214ENST00000554604 PKHD1P08F94 4074 aa8.53□□□□□ -1.04
SHMT2-214ENST00000554604 IGLV4-3A0A075B6K6 122 aa8.53□□□□□ -1.04
SHMT2-214ENST00000554604 TRBV7-3A0A075B6L6 115 aa8.53□□□□□ -1.04
SHMT2-214ENST00000554604 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
SHMT2-214ENST00000554604 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
SHMT2-214ENST00000554604 HSD52Q0P140 79 aa8.53□□□□□ -1.04
SHMT2-214ENST00000554604 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
SHMT2-214ENST00000554604 TRBV6-4A0A1B0GX49 114 aa8.52□□□□□ -1.05
SHMT2-214ENST00000554604 HERVK_113P61574 105 aa8.52□□□□□ -1.05
SHMT2-214ENST00000554604 SEC11AP67812 179 aa8.52□□□□□ -1.05
SHMT2-214ENST00000554604 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.05
SHMT2-214ENST00000554604 AMELXQ99217 191 aa8.52□□□□□ -1.05
SHMT2-214ENST00000554604 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
SHMT2-214ENST00000554604 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.05
SHMT2-214ENST00000554604 GYPEP15421 78 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 UBE2D3P61077 147 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 UBE2D2P62837 147 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 TNP2Q05952 138 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 VCX2Q9H322 139 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 UBE2D4Q9Y2X8 147 aa8.51□□□□□ -1.05
SHMT2-214ENST00000554604 TRBV25-1A0A075B6N4 114 aa8.5□□□□□ -1.05
SHMT2-214ENST00000554604 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
SHMT2-214ENST00000554604 FAM104AQ969W3 186 aa8.5□□□□□ -1.05
SHMT2-214ENST00000554604 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-214ENST00000554604 PRADC1Q9BSG0 188 aa8.5□□□□□ -1.05
SHMT2-214ENST00000554604 KRTAP1-5Q9BYS1 174 aa8.5□□□□□ -1.05
SHMT2-214ENST00000554604 TRAV8-6A0A0B4J262 113 aa8.49□□□□□ -1.05
SHMT2-214ENST00000554604 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
SHMT2-214ENST00000554604 MYMXA0A1B0GTQ4 84 aa8.49□□□□□ -1.05
SHMT2-214ENST00000554604 MRPS36P82909 103 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms