RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 IGLV5-52A0A0A0MRZ9 124 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV10-2A0A0K0K1G8 114 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 KLLNB2CW77 178 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 LGALS9O00182 355 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 NPFFO15130 113 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 BLCAPP62952 87 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 KLK9Q2XQG4 91 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 MEIG1Q5JSS6 88 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 APRG1Q8IVJ8 170 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 BPESC1Q9GZL8 116 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 ICOSQ9Y6W8 199 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 UTP20O75691 2785 aaKnown RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV3-16A0A0C4DH30 117 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV30A0A0K0K1B3 111 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 FAM223BA6NKX1 122 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 KNCNA6PVL3 124 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 M0QXV9 152 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 NDUFA4O00483 81 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 BRI3O95415 125 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 RPL13AP40429 203 aaKnown RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 SPINK13Q1W4C9 94 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 C10orf99Q6UWK7 81 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 FAM223AQ8IWN6 122 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 C20orf203Q8NBC4 194 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 TIMM21Q9BVV7 248 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 ZNF469Q96JG9 3925 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 NCOR2Q9Y618 2525 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 TRBV6-5A0A0K0K1A5 114 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 IGKV2-29A2NJV5 120 aaPredicted RBP1.86□□□□□ -2.11
PRPF39-207ENST00000554439 I3L3M4 83 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV1-69P01742 117 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 IGHG2P01859 326 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 CD28P10747 220 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 LMO4P61968 165 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 NSUN5P1Q3KNT7 163 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 PRR26Q8N8Z3 221 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 DCANP1Q8TF63 244 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 C9orf85Q96MD7 179 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 DUX5Q96PT3 197 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 NDUFA12Q9UI09 145 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 MOB4Q9Y3A3 225 aa1.86□□□□□ -2.11
PRPF39-207ENST00000554439 MXRA5Q9NR99 2828 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 ITPR1Q14643 2758 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 CHD8Q9HCK8 2581 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV3-38A0A0C4DH36 116 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 IGLV5-39A0A0G2JS06 123 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 TMEM89A2RUT3 159 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 RBMY1A1P0DJD3 496 aaKnown RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 RBMY1CP0DJD4 496 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV4-38-2P0DP08 117 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 RBMY1FQ15415 496 aaKnown RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 RHOHQ15669 191 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 MPLKIPQ8TAP9 179 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 SMCR5Q8TEV8 140 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 ZNF625Q96I27 306 aaPredicted RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 DAZ1Q9NQZ3 744 aaKnown RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 FBN2P35556 2912 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 NIPBLQ6KC79 2804 aaeCLIP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV1-58A0A0C4DH39 117 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 A0A0J9YX75 114 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 FAM236AA0A1B0GUQ0 79 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 FAM236BA0A1B0GV22 79 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 H3BUX3 64 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 LST1O00453 97 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 MRPS36P82909 103 aaKnown RBP1.85□□□□□ -2.11
PRPF39-207ENST00000554439 MIAQ16674 131 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 FBXL19-AS1Q494R0 122 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 Q6Q795 121 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 TMEM61Q8N0U2 210 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 VSIG2Q96IQ7 327 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 PPDPFQ9H3Y8 114 aa1.85□□□□□ -2.11
PRPF39-207ENST00000554439 IGHV1OR15-1A0A075B7D0 117 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 NDUFA7O95182 113 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 COX6A2Q02221 97 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 Q8N2B8 174 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 LINC01587Q99440 93 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 LINC00467Q9BRT7 94 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 SPANXDQ9BXN6 97 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 SPANXCQ9NY87 97 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 CDKN2A-AS1Q9UH64 79 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 USP9YO00507 2555 aaPredicted RBP1.84□□□□□ -2.11
PRPF39-207ENST00000554439 WNK1Q9H4A3 2382 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 SPTBN4Q9H254 2564 aa1.84□□□□□ -2.11
PRPF39-207ENST00000554439 CENPEQ02224 2701 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 LOC107984640A0A0U1RRK4 108 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 H3BT86 120 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 K7ENP7 123 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 RS1O15537 224 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 COX6CP09669 75 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-207ENST00000554439 CD164L2Q6UWJ8 174 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 LINC01600Q96MT4 127 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 CHCHD7Q9BUK0 85 aa1.84□□□□□ -2.12
PRPF39-207ENST00000554439 KLK5Q9Y337 293 aaPredicted RBP1.84□□□□□ -2.12
PRPF39-207ENST00000554439 IGHV4-61A0A0C4DH41 118 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 TINCRA0A1B0GVN0 87 aa1.83□□□□□ -2.12
PRPF39-207ENST00000554439 LINC00694P0DN24 101 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms