RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 EREGO14944 169 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 FCER1GP30273 86 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 RPL36AP83881 106 aaKnown RBP8.81□□□□□ -1
SHMT2-211ENST00000554310 LAGE3Q14657 143 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 RPL36ALQ969Q0 106 aaKnown RBP8.81□□□□□ -1
SHMT2-211ENST00000554310 C14orf144Q96I85 54 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 TNFRSF18Q9Y5U5 241 aa8.81□□□□□ -1
SHMT2-211ENST00000554310 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 TRAV26-2A0A0B4J265 109 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 IBA57-AS1B1ANH7 110 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 K7EMI3 77 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 SMIM17P0DL12 118 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 UBE2D3P61077 147 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 UBE2D2P62837 147 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 SMIM2Q9BVW6 85 aa8.8□□□□□ -1
SHMT2-211ENST00000554310 IGHV3-30P01768 117 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 IGHV3-33P01772 117 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 MGPP08493 103 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 RPL32P62910 135 aaKnown RBP8.79□□□□□ -1
SHMT2-211ENST00000554310 MRPL52Q86TS9 123 aaKnown RBP8.79□□□□□ -1
SHMT2-211ENST00000554310 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
SHMT2-211ENST00000554310 A0A087WTM6 91 aa8.78□□□□□ -1
SHMT2-211ENST00000554310 IGLC3P0DOY3 106 aa8.78□□□□□ -1
SHMT2-211ENST00000554310 KRTAP10-2P60368 255 aa8.78□□□□□ -1
SHMT2-211ENST00000554310 SUMO2P61956 95 aaKnown RBP8.78□□□□□ -1
SHMT2-211ENST00000554310 ATOH7Q8N100 152 aa8.78□□□□□ -1
SHMT2-211ENST00000554310 UQCR10Q9UDW1 63 aa8.78□□□□□ -1
SHMT2-211ENST00000554310 RYR1P21817 5038 aa8.77□□□□□ -1
SHMT2-211ENST00000554310 LRP1BQ9NZR2 4599 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 F5H697 171 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 PSCAO43653 123 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 NEXN-AS1Q8NBZ9 246 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 Q9HAA7 133 aa8.77□□□□□ -1.01
SHMT2-211ENST00000554310 ORMDL2Q53FV1 153 aa8.76□□□□□ -1.01
SHMT2-211ENST00000554310 LBHQ53QV2 105 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-211ENST00000554310 RPL39LQ96EH5 51 aaKnown RBP8.76□□□□□ -1.01
SHMT2-211ENST00000554310 CHCHD7Q9BUK0 85 aa8.76□□□□□ -1.01
SHMT2-211ENST00000554310 ST20Q9HBF5 79 aa8.76□□□□□ -1.01
SHMT2-211ENST00000554310 PGPEP1Q9NXJ5 209 aa8.76□□□□□ -1.01
SHMT2-211ENST00000554310 TRAV8-3A0A0A6YYJ7 113 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 H7C1H1 209 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 ATP5LO75964 103 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 Q8N3U1 123 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 DNAH5Q8TE73 4624 aa8.75□□□□□ -1.01
SHMT2-211ENST00000554310 TRBV6-8A0A0A6YYG3 113 aa8.74□□□□□ -1.01
SHMT2-211ENST00000554310 H0Y8G0 127 aa8.74□□□□□ -1.01
SHMT2-211ENST00000554310 TCAPO15273 167 aa8.74□□□□□ -1.01
SHMT2-211ENST00000554310 TMEM97Q5BJF2 176 aa8.74□□□□□ -1.01
SHMT2-211ENST00000554310 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
SHMT2-211ENST00000554310 TM2D2Q9BX73 214 aa8.74□□□□□ -1.01
SHMT2-211ENST00000554310 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
SHMT2-211ENST00000554310 A0A087WX48 190 aa8.73□□□□□ -1.01
SHMT2-211ENST00000554310 LINC01549A6NIU2 74 aa8.73□□□□□ -1.01
SHMT2-211ENST00000554310 G0S2P27469 103 aa8.73□□□□□ -1.01
SHMT2-211ENST00000554310 POLR2KP53803 58 aaKnown RBP8.73□□□□□ -1.01
SHMT2-211ENST00000554310 DNAJC30Q96LL9 226 aa8.73□□□□□ -1.01
SHMT2-211ENST00000554310 hDV102S1A0JD36 115 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 LRCOL1A6NCL2 159 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 M0QY20 66 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 M0R143 59 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 TOMM6Q96B49 74 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 RMI2Q96E14 147 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
SHMT2-211ENST00000554310 VCYO14598 125 aa8.71□□□□□ -1.02
SHMT2-211ENST00000554310 HNRNPA3P51991 378 aaKnown RBP8.71□□□□□ -1.02
SHMT2-211ENST00000554310 Q6ZN92 141 aa8.71□□□□□ -1.02
SHMT2-211ENST00000554310 NTN5Q8WTR8 489 aaPredicted RBP8.71□□□□□ -1.02
SHMT2-211ENST00000554310 COX11Q9Y6N1 276 aa8.71□□□□□ -1.02
SHMT2-211ENST00000554310 ODF1Q14990 250 aa8.7□□□□□ -1.02
SHMT2-211ENST00000554310 PMCHL2Q9BQD1 86 aa8.7□□□□□ -1.02
SHMT2-211ENST00000554310 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
SHMT2-211ENST00000554310 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
SHMT2-211ENST00000554310 HSPG2P98160 4391 aa8.7□□□□□ -1.02
SHMT2-211ENST00000554310 APOBP04114 4563 aaKnown RBP8.7□□□□□ -1.02
SHMT2-211ENST00000554310 PCLOQ9Y6V0 5065 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 TRBV25-1A0A075B6N4 114 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 TRAV12-1A0A0B4J245 112 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.69□□□□□ -1.02
SHMT2-211ENST00000554310 PRSS1P07477 247 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 Q8N814 137 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 CHCHD5Q9BSY4 110 aa8.69□□□□□ -1.02
SHMT2-211ENST00000554310 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
SHMT2-211ENST00000554310 MPV17L2Q567V2 206 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 SLC25A34Q6PIV7 304 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 C2orf66Q6UXQ4 117 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
SHMT2-211ENST00000554310 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms