RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
PTPN21-205ENST00000554270 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
PTPN21-205ENST00000554270 TRIAP1O43715 76 aa8.4□□□□□ -1.06
PTPN21-205ENST00000554270 TMEM262E9PQX1 116 aa8.4□□□□□ -1.06
PTPN21-205ENST00000554270 Q6ZSN1 163 aa8.4□□□□□ -1.06
PTPN21-205ENST00000554270 H3BMM0 161 aa8.4□□□□□ -1.07
PTPN21-205ENST00000554270 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.07
PTPN21-205ENST00000554270 UBE2WQ96B02 151 aa8.4□□□□□ -1.07
PTPN21-205ENST00000554270 SPATA25Q9BR10 227 aa8.4□□□□□ -1.07
PTPN21-205ENST00000554270 M0QXV9 152 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 RBMY1A1P0DJD3 496 aaKnown RBP8.39□□□□□ -1.07
PTPN21-205ENST00000554270 RBMY1CP0DJD4 496 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 RBMY1FQ15415 496 aaKnown RBP8.39□□□□□ -1.07
PTPN21-205ENST00000554270 ADAMTSL4-AS1Q5T5F5 129 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 GCN1Q92616 2671 aaKnown RBP8.39□□□□□ -1.07
PTPN21-205ENST00000554270 GAGE7O76087 117 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
PTPN21-205ENST00000554270 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
PTPN21-205ENST00000554270 LINC01619G3V211 115 aa8.38□□□□□ -1.07
PTPN21-205ENST00000554270 MRPL23Q16540 153 aaKnown RBP8.38□□□□□ -1.07
PTPN21-205ENST00000554270 ICOSQ9Y6W8 199 aa8.38□□□□□ -1.07
PTPN21-205ENST00000554270 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
PTPN21-205ENST00000554270 INSP01308 110 aa8.38□□□□□ -1.07
PTPN21-205ENST00000554270 A0A096LPF7 62 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 PFN2P35080 140 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 UBE2D3P61077 147 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 UBE2D2P62837 147 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 FHL3Q13643 280 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
PTPN21-205ENST00000554270 LINC00158P58513 81 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 RPL36AP83881 106 aaKnown RBP8.37□□□□□ -1.07
PTPN21-205ENST00000554270 POM121L12Q8N7R1 296 aa8.37□□□□□ -1.07
PTPN21-205ENST00000554270 RPL36ALQ969Q0 106 aaKnown RBP8.37□□□□□ -1.07
PTPN21-205ENST00000554270 TRAV4A0A0B4J268 109 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 NSUN5P1Q3KNT7 163 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 FAM19A4Q96LR4 140 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 DSCR9P59020 149 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 TMEM263Q8WUH6 116 aaKnown RBP8.36□□□□□ -1.07
PTPN21-205ENST00000554270 WFDC10AQ9H1F0 79 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 ZNF702PQ9H963 129 aa8.36□□□□□ -1.07
PTPN21-205ENST00000554270 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
PTPN21-205ENST00000554270 Q6ZTI0 123 aa8.35□□□□□ -1.07
PTPN21-205ENST00000554270 HELZ2Q9BYK8 2649 aaKnown RBP8.35□□□□□ -1.07
PTPN21-205ENST00000554270 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
PTPN21-205ENST00000554270 CRLF1O75462 422 aa8.34□□□□□ -1.07
PTPN21-205ENST00000554270 IGHV4-31P0DP07 118 aa8.34□□□□□ -1.07
PTPN21-205ENST00000554270 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
PTPN21-205ENST00000554270 BBC3Q96PG8 261 aaPredicted RBP8.34□□□□□ -1.07
PTPN21-205ENST00000554270 MAP6D1Q9H9H5 199 aa8.34□□□□□ -1.07
PTPN21-205ENST00000554270 RBMY1BA6NDE4 496 aaKnown RBP8.33□□□□□ -1.08
PTPN21-205ENST00000554270 RBMY1EA6NEQ0 496 aaKnown RBP8.33□□□□□ -1.08
PTPN21-205ENST00000554270 RBMY1DP0C7P1 496 aaKnown RBP8.33□□□□□ -1.08
PTPN21-205ENST00000554270 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
PTPN21-205ENST00000554270 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
PTPN21-205ENST00000554270 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
PTPN21-205ENST00000554270 Q9HAA7 133 aa8.33□□□□□ -1.08
PTPN21-205ENST00000554270 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
PTPN21-205ENST00000554270 NXPH4O95158 308 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 DNAL4O96015 105 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 WFDC11Q8NEX6 87 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 PLA2G2AP14555 144 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 Q6YL49 198 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 COX6A2Q02221 97 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 PAX4O43316 350 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 GAGE2AQ6NT46 116 aa8.32□□□□□ -1.08
PTPN21-205ENST00000554270 IFITM1P13164 125 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 ESM1Q9NQ30 184 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 MIAQ16674 131 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 KLK9Q2XQG4 91 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 UBE2D4Q9Y2X8 147 aa8.31□□□□□ -1.08
PTPN21-205ENST00000554270 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
PTPN21-205ENST00000554270 SPANXA1Q9NS26 97 aa8.3□□□□□ -1.08
PTPN21-205ENST00000554270 AMELXQ99217 191 aa8.3□□□□□ -1.08
PTPN21-205ENST00000554270 DEFB113Q30KQ7 82 aa8.3□□□□□ -1.08
PTPN21-205ENST00000554270 HTN3P15516 51 aa8.29□□□□□ -1.08
PTPN21-205ENST00000554270 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
PTPN21-205ENST00000554270 J3QLI3 93 aa8.29□□□□□ -1.08
PTPN21-205ENST00000554270 CCL24O00175 119 aa8.29□□□□□ -1.08
PTPN21-205ENST00000554270 DEFB114Q30KQ6 69 aa8.29□□□□□ -1.08
PTPN21-205ENST00000554270 APCP25054 2843 aa8.29□□□□□ -1.08
PTPN21-205ENST00000554270 H7C423 109 aa8.28□□□□□ -1.08
PTPN21-205ENST00000554270 CRPP02741 224 aa8.28□□□□□ -1.08
PTPN21-205ENST00000554270 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
PTPN21-205ENST00000554270 ATRQ13535 2644 aa8.28□□□□□ -1.08
PTPN21-205ENST00000554270 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms