RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KLK9Q2XQG4 91 aa6.87□□□□□ -1.31
SIX4-202ENST00000554079 KLK9Q9UKQ9 250 aa6.87□□□□□ -1.31
SIX4-202ENST00000554079 CEP250Q9BV73 2442 aa6.87□□□□□ -1.31
SIX4-202ENST00000554079 PLAC8L1A1L4L8 177 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 IGKV2-29A2NJV5 120 aaPredicted RBP6.86□□□□□ -1.31
SIX4-202ENST00000554079 NDUFC1O43677 76 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.86□□□□□ -1.31
SIX4-202ENST00000554079 SPTBN4Q9H254 2564 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 KLLNB2CW77 178 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 PIK3CD-AS1Q5SR53 167 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 UNQ9165/PRO28630Q6UXU0 137 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 LINC00337Q8N6G1 96 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 CCL17Q92583 94 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 Q96MF0 132 aa6.86□□□□□ -1.31
SIX4-202ENST00000554079 F6UB75 175 aa6.85□□□□□ -1.31
SIX4-202ENST00000554079 CD164Q04900 197 aa6.85□□□□□ -1.31
SIX4-202ENST00000554079 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
SIX4-202ENST00000554079 MPLKIPQ8TAP9 179 aa6.85□□□□□ -1.31
SIX4-202ENST00000554079 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 CRPP02741 224 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 CLEC19AQ6UXS0 136 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 IGHV3-16A0A0C4DH30 117 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 H0YGX0 51 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 LECT2O14960 151 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 SAA4P35542 130 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 C22orf34Q6ZV56 151 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 SEM1Q6ZVN7 128 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 Q8N6K4 173 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 RETNQ9HD89 108 aa6.84□□□□□ -1.31
SIX4-202ENST00000554079 ABCA4P78363 2273 aa6.84□□□□□ -1.32
SIX4-202ENST00000554079 ZFHX3Q15911 3703 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 POLEQ07864 2286 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 COX6A2Q02221 97 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 MOB4Q9Y3A3 225 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.83□□□□□ -1.32
SIX4-202ENST00000554079 ORMDL1Q9P0S3 153 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 DPM3Q9P2X0 92 aa6.83□□□□□ -1.32
SIX4-202ENST00000554079 TRBV7-4A0A0J9YYF1 115 aa6.82□□□□□ -1.32
SIX4-202ENST00000554079 SLPIP03973 132 aa6.82□□□□□ -1.32
SIX4-202ENST00000554079 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 MED13LQ71F56 2210 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 CNOT1A5YKK6 2376 aaKnown RBP6.81□□□□□ -1.32
SIX4-202ENST00000554079 DMXL2Q8TDJ6 3036 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
SIX4-202ENST00000554079 ODF3BA8MYP8 253 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 MIFP14174 115 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
SIX4-202ENST00000554079 CACNA1AO00555 2505 aa6.8□□□□□ -1.32
SIX4-202ENST00000554079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
SIX4-202ENST00000554079 TMEM89A2RUT3 159 aa6.8□□□□□ -1.32
SIX4-202ENST00000554079 PAX4O43316 350 aa6.8□□□□□ -1.32
SIX4-202ENST00000554079 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 ESRGQ1W209 222 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 WNK2Q9Y3S1 2297 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 LAMTOR3Q9UHA4 124 aa6.79□□□□□ -1.32
SIX4-202ENST00000554079 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
SIX4-202ENST00000554079 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
SIX4-202ENST00000554079 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
SIX4-202ENST00000554079 ECSCRQ19T08 205 aa6.78□□□□□ -1.32
SIX4-202ENST00000554079 Q8N9W7 124 aa6.78□□□□□ -1.32
SIX4-202ENST00000554079 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
SIX4-202ENST00000554079 PRRC2CQ9Y520 2896 aaKnown RBP6.78□□□□□ -1.32
SIX4-202ENST00000554079 IGHV3OR16-12A0A075B7B8 117 aa6.77□□□□□ -1.32
SIX4-202ENST00000554079 LINC00242Q5T6M2 205 aa6.77□□□□□ -1.32
SIX4-202ENST00000554079 TM2D3Q9BRN9 247 aa6.77□□□□□ -1.32
SIX4-202ENST00000554079 SND1-IT1Q9HBX3 110 aa6.77□□□□□ -1.32
SIX4-202ENST00000554079 ATP1A1-AS1Q5TC04 95 aa6.77□□□□□ -1.33
SIX4-202ENST00000554079 SPTBN2O15020 2390 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 A0A1W2PNU3 283 aaPredicted RBP6.76□□□□□ -1.33
SIX4-202ENST00000554079 ATP6V0E1O15342 81 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 LINC01547P58512 204 aaPredicted RBP6.76□□□□□ -1.33
SIX4-202ENST00000554079 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 PROK1P58294 105 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 MINOS1Q5TGZ0 78 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 Q6ZTI0 123 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
SIX4-202ENST00000554079 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
SIX4-202ENST00000554079 Q9UF83 564 aa6.75□□□□□ -1.33
SIX4-202ENST00000554079 A0A087WZ39 114 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 G3V318 75 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 Q6ZTC4 211 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 NCOR2Q9Y618 2525 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 LY6G6DO95868 133 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 Q8NA96 180 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 TACC2O95359 2948 aa6.74□□□□□ -1.33
SIX4-202ENST00000554079 IGHV1OR15-1A0A075B7D0 117 aa6.73□□□□□ -1.33
SIX4-202ENST00000554079 IGHV3-73A0A0B4J1V6 119 aa6.73□□□□□ -1.33
SIX4-202ENST00000554079 CCL18P55774 89 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms