RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 H7C423 109 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 VCYO14598 125 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 TCAPO15273 167 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 PPBPP02775 128 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 S100PP25815 95 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 C14orf177Q52M58 125 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 LINC00269Q8N2A0 174 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 DEFB104AQ8WTQ1 72 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 NTN5Q8WTR8 489 aaPredicted RBP5.57□□□□□ -1.52
PSEN1-209ENST00000553855 TMEM18Q96B42 140 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
PSEN1-209ENST00000553855 IGLV5-52A0A0A0MRZ9 124 aa5.56□□□□□ -1.52
PSEN1-209ENST00000553855 TRAV8-4A0A0B4J246 113 aa5.56□□□□□ -1.52
PSEN1-209ENST00000553855 A0A1B0GUV1 79 aa5.56□□□□□ -1.52
PSEN1-209ENST00000553855 RNF185Q96GF1 192 aa5.56□□□□□ -1.52
PSEN1-209ENST00000553855 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
PSEN1-209ENST00000553855 C7orf77A4D0Y5 90 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 SMKR1H3BMG3 65 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 HLA-DQA1P01909 254 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 ZNF25P17030 456 aaPredicted RBP5.55□□□□□ -1.52
PSEN1-209ENST00000553855 REG3AQ06141 175 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 MRPL51Q4U2R6 128 aaKnown RBP5.55□□□□□ -1.52
PSEN1-209ENST00000553855 CLPSL2Q6UWE3 100 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 Q8N814 137 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 BAALCQ8WXS3 180 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 IMMP2LQ96T52 175 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 C20orf78Q9BR46 151 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 TMEM242Q9NWH2 141 aa5.55□□□□□ -1.52
PSEN1-209ENST00000553855 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
PSEN1-209ENST00000553855 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 A0A1B0GXF2 115 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
PSEN1-209ENST00000553855 D6R8Y8 96 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 PHOX2AO14813 284 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 LECT2O14960 151 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 FGF6P10767 208 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 RAB5AP20339 215 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 POLR2KP53803 58 aaKnown RBP5.54□□□□□ -1.52
PSEN1-209ENST00000553855 KRTAP10-2P60368 255 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 ENHOQ6UWT2 76 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 TMEM136Q6ZRR5 245 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 ORMDL3Q8N138 153 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
PSEN1-209ENST00000553855 TRAV9-1A0A075B6T8 112 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 LRCOL1A6NCL2 159 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 RPS10P46783 165 aaKnown RBP5.53□□□□□ -1.52
PSEN1-209ENST00000553855 C20orf203Q8NBC4 194 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 PRELID3AQ96N28 172 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 LAMTOR2Q9Y2Q5 125 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 FAT2Q9NYQ8 4349 aa5.53□□□□□ -1.52
PSEN1-209ENST00000553855 KIAA1109Q2LD37 5005 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 IGLV4-60A0A075B6I1 120 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 IGLV10-54A0A075B6I4 117 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.52□□□□□ -1.53
PSEN1-209ENST00000553855 TRBV24-1A0A075B6N3 115 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 CDK2AP2O75956 126 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 TSHBP01222 138 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 RPL32P62910 135 aaKnown RBP5.52□□□□□ -1.53
PSEN1-209ENST00000553855 RHEBQ15382 184 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 NRACQ8N912 160 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 DNAH11Q96DT5 4516 aa5.52□□□□□ -1.53
PSEN1-209ENST00000553855 HECTD4Q9Y4D8 3996 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 GAS8-AS1O95177 125 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 ESDP10768 282 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 SS18Q15532 418 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 COX19Q49B96 90 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 SMIM2Q9BVW6 85 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
PSEN1-209ENST00000553855 SNAPINO95295 136 aa5.5□□□□□ -1.53
PSEN1-209ENST00000553855 NPYP01303 97 aa5.5□□□□□ -1.53
PSEN1-209ENST00000553855 APOC3P02656 99 aa5.5□□□□□ -1.53
PSEN1-209ENST00000553855 MRPL52Q86TS9 123 aaKnown RBP5.5□□□□□ -1.53
PSEN1-209ENST00000553855 SVBPQ8N300 66 aa5.5□□□□□ -1.53
PSEN1-209ENST00000553855 CARHSP1Q9Y2V2 147 aaKnown RBP5.5□□□□□ -1.53
PSEN1-209ENST00000553855 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
PSEN1-209ENST00000553855 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-209ENST00000553855 LOC389332A0A1B0GUA5 103 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 CCL25O15444 150 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 G0S2P27469 103 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
PSEN1-209ENST00000553855 WFDC2Q14508 124 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 ZNF664Q8N3J9 261 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
PSEN1-209ENST00000553855 CHCHD10Q8WYQ3 142 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-209ENST00000553855 PKD1P98161 4303 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 MT-ND6P03923 174 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
PSEN1-209ENST00000553855 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms