RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 ATP5LO75964 103 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-206ENST00000553830 Q6ZN92 141 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 MRPL52Q86TS9 123 aaKnown RBP9.6□□□□□ -0.87
PRKCH-206ENST00000553830 TMEM141Q96I45 108 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 HIST1H2BLQ99880 126 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 UPK3BQ9BT76 320 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 TIMM21Q9BVV7 248 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 Q9H8V8 135 aa9.6□□□□□ -0.87
PRKCH-206ENST00000553830 PRSS1P07477 247 aa9.59□□□□□ -0.87
PRKCH-206ENST00000553830 KRTDAPP60985 99 aa9.59□□□□□ -0.87
PRKCH-206ENST00000553830 ZNF664Q8N3J9 261 aa9.59□□□□□ -0.87
PRKCH-206ENST00000553830 TIMM17AQ99595 171 aa9.59□□□□□ -0.87
PRKCH-206ENST00000553830 LINC01549A6NIU2 74 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 DNAH10OSP0CZ25 163 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 LINC01556Q5JQF7 62 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 LINC00269Q8N2A0 174 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 VCX2Q9H322 139 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 PYGO1Q9Y3Y4 419 aa9.58□□□□□ -0.88
PRKCH-206ENST00000553830 TENM2Q9NT68 2774 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 A0A1B0GUV1 79 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
PRKCH-206ENST00000553830 TEX43Q6ZNM6 134 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 FAM104AQ969W3 186 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 UBE2WQ96B02 151 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-206ENST00000553830 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
PRKCH-206ENST00000553830 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
PRKCH-206ENST00000553830 TRAV13-1A0A0B4J241 112 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 CRPP02741 224 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 LGALS9CQ6DKI2 356 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 OR10D4PQ8NGN7 298 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 LINC00476Q8WZB0 136 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 Q9HAA7 133 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
PRKCH-206ENST00000553830 STARD9Q9P2P6 4700 aa9.56□□□□□ -0.88
PRKCH-206ENST00000553830 IGLV10-54A0A075B6I4 117 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 M0R2N4 97 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 REG3AQ06141 175 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 PAPPA-AS1Q5QFB9 102 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 PMCHL2Q9BQD1 86 aa9.55□□□□□ -0.88
PRKCH-206ENST00000553830 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
PRKCH-206ENST00000553830 PMVKQ15126 192 aa9.54□□□□□ -0.88
PRKCH-206ENST00000553830 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
PRKCH-206ENST00000553830 TRAV9-2A0A087WT02 112 aa9.53□□□□□ -0.88
PRKCH-206ENST00000553830 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
PRKCH-206ENST00000553830 SPATA12Q7Z6I5 190 aa9.53□□□□□ -0.88
PRKCH-206ENST00000553830 AMELXQ99217 191 aa9.53□□□□□ -0.88
PRKCH-206ENST00000553830 KRTAP1-5Q9BYS1 174 aa9.53□□□□□ -0.88
PRKCH-206ENST00000553830 NPSP0C0P6 89 aa9.52□□□□□ -0.89
PRKCH-206ENST00000553830 AKR1D1P51857 326 aa9.52□□□□□ -0.89
PRKCH-206ENST00000553830 ENHOQ6UWT2 76 aa9.52□□□□□ -0.89
PRKCH-206ENST00000553830 C10orf126Q8N4M7 172 aa9.52□□□□□ -0.89
PRKCH-206ENST00000553830 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
PRKCH-206ENST00000553830 A0A0J9YXV3 536 aa9.51□□□□□ -0.89
PRKCH-206ENST00000553830 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
PRKCH-206ENST00000553830 LINC00959A0A1B0GUT2 108 aa9.51□□□□□ -0.89
PRKCH-206ENST00000553830 SS18Q15532 418 aa9.51□□□□□ -0.89
PRKCH-206ENST00000553830 XCL1P47992 114 aa9.5□□□□□ -0.89
PRKCH-206ENST00000553830 UBE2D1P51668 147 aa9.5□□□□□ -0.89
PRKCH-206ENST00000553830 ODF1Q14990 250 aa9.5□□□□□ -0.89
PRKCH-206ENST00000553830 TTC32Q5I0X7 151 aa9.5□□□□□ -0.89
PRKCH-206ENST00000553830 MRPL35Q9NZE8 188 aaKnown RBP9.5□□□□□ -0.89
PRKCH-206ENST00000553830 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 IBA57-AS1B1ANH7 110 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 CCL25O15444 150 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 PET117Q6UWS5 81 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 CHCHD10Q8WYQ3 142 aaPredicted RBP9.49□□□□□ -0.89
PRKCH-206ENST00000553830 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
PRKCH-206ENST00000553830 C20orf202A1L168 122 aa9.48□□□□□ -0.89
PRKCH-206ENST00000553830 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
PRKCH-206ENST00000553830 CHAC1Q9BUX1 264 aa9.48□□□□□ -0.89
PRKCH-206ENST00000553830 C1orf43Q9BWL3 253 aa9.48□□□□□ -0.89
PRKCH-206ENST00000553830 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
PRKCH-206ENST00000553830 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 F8VRH5 84 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 COX6A2Q02221 97 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 MIAQ16674 131 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
PRKCH-206ENST00000553830 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
PRKCH-206ENST00000553830 LINC01545Q5VT33 79 aa9.46□□□□□ -0.9
PRKCH-206ENST00000553830 C5orf38Q86SI9 138 aa9.46□□□□□ -0.9
PRKCH-206ENST00000553830 LINC00469Q8N7U9 141 aa9.46□□□□□ -0.9
PRKCH-206ENST00000553830 LOC105371267A0A1B0GV96 52 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 DPM2O94777 84 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 IGLC3P0DOY3 106 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 RMI2Q96E14 147 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 ALMS1Q8TCU4 4167 aa9.45□□□□□ -0.9
PRKCH-206ENST00000553830 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms