RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 F8W036 122 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 UBE2L6O14933 153 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 PMCHP20382 165 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 LINC00315P59091 139 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
ATXN3-222ENST00000553570 TSKUQ8WUA8 353 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 GTSF1Q8WW33 167 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 UPK3BQ9BT76 320 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
ATXN3-222ENST00000553570 KLK12Q9UKR0 248 aa3.14□□□□□ -1.91
ATXN3-222ENST00000553570 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 M0QY20 66 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 MT-ND4LP03901 98 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 ANGP03950 147 aaKnown RBP3.13□□□□□ -1.91
ATXN3-222ENST00000553570 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
ATXN3-222ENST00000553570 UBE2D3P61077 147 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 UBE2D2P62837 147 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 MRPL54Q6P161 138 aaKnown RBP3.13□□□□□ -1.91
ATXN3-222ENST00000553570 ERASQ7Z444 233 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 SPATA12Q7Z6I5 190 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 C10orf126Q8N4M7 172 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 GATD1Q8NB37 220 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 NUP35Q8NFH5 326 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
ATXN3-222ENST00000553570 DNAJC30Q96LL9 226 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 NAT8BQ9UHF3 227 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 V9GYV3 84 aa3.13□□□□□ -1.91
ATXN3-222ENST00000553570 TRBV25-1A0A075B6N4 114 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 IGHV1-24A0A0C4DH33 117 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 SMKR1H3BMG3 65 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 LECT2O14960 151 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 PPP1R2P9O14990 202 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 NDUFS6O75380 124 aaKnown RBP3.12□□□□□ -1.91
ATXN3-222ENST00000553570 CRPP02741 224 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 DNAH10OSP0CZ25 163 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 CKS2P33552 79 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 CTRLP40313 264 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 COTL1Q14019 142 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 ELOBQ15370 118 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM97Q5BJF2 176 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 RNASEKQ6P5S7 137 aaKnown RBP3.12□□□□□ -1.91
ATXN3-222ENST00000553570 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 LYSTQ99698 3801 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 DHRS4-AS1Q9P1J3 65 aa3.12□□□□□ -1.91
ATXN3-222ENST00000553570 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM218A2RU14 115 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 IBA57-AS1B1ANH7 110 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 SNAPINO95295 136 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 NCR2O95944 276 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 APOC3P02656 99 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 S100A8P05109 93 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 RAB4AP20338 218 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 FCER1GP30273 86 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 LINC01556Q5JQF7 62 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 NIT1Q86X76 327 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 SVBPQ8N300 66 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 Q8N976 141 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 BAALCQ8WXS3 180 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 RMI2Q96E14 147 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 SEC11CQ9BY50 192 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-222ENST00000553570 CARHSP1Q9Y2V2 147 aaKnown RBP3.11□□□□□ -1.91
ATXN3-222ENST00000553570 IGLV10-54A0A075B6I4 117 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-222ENST00000553570 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-222ENST00000553570 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-222ENST00000553570 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 K7EP13 123 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 HLA-DQA1P01909 254 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 APCSP02743 223 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 PKIAP61925 76 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 Q0VG73 95 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-222ENST00000553570 MPV17L2Q567V2 206 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 LINC00269Q8N2A0 174 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 BTF3L4Q96K17 158 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 RPS10P5Q9NQ39 176 aa3.1□□□□□ -1.91
ATXN3-222ENST00000553570 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms