RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 CRYM-AS1A6NIL9 109 aa0.72□□□□□ -2.29
PCNX4-206ENST00000553513 TMEM262E9PQX1 116 aa0.72□□□□□ -2.29
PCNX4-206ENST00000553513 MGPP08493 103 aa0.72□□□□□ -2.29
PCNX4-206ENST00000553513 C14orf144Q96I85 54 aa0.72□□□□□ -2.29
PCNX4-206ENST00000553513 NXT2Q9NPJ8 142 aaKnown RBP0.72□□□□□ -2.29
PCNX4-206ENST00000553513 CACNA1EQ15878 2313 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 Q0VG73 95 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 FAM167A-AS1Q96KT0 104 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 PRO1854Q9UHT4 67 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 AP4S1Q9Y587 144 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 ARL2-SNX15V9GYD0 113 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 WNK3Q9BYP7 1800 aa0.71□□□□□ -2.3
PCNX4-206ENST00000553513 LRRC37A2A6NM11 1700 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 PRH1P02810 166 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 RBP2P50120 134 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 Q6JHZ5 121 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 SMR3AQ99954 134 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 CNFNQ9BYD5 112 aa0.7□□□□□ -2.3
PCNX4-206ENST00000553513 ARHGAP5Q13017 1502 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 KIF21AQ7Z4S6 1674 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 SHANK2Q9UPX8 1470 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 TRAV22A0A0B4J277 110 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 SPINK1P00995 79 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 UBA52P62987 128 aaKnown RBP0.69□□□□□ -2.3
PCNX4-206ENST00000553513 PRO0255Q9UI72 69 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 ERCC6L2Q5T890 1561 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 TNCP24821 2201 aa0.69□□□□□ -2.3
PCNX4-206ENST00000553513 SBF2Q86WG5 1849 aa0.68□□□□□ -2.3
PCNX4-206ENST00000553513 TRAV30A0A087WSZ9 112 aa0.68□□□□□ -2.3
PCNX4-206ENST00000553513 S100A10P60903 97 aa0.68□□□□□ -2.3
PCNX4-206ENST00000553513 CACNA1HO95180 2353 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 IGLC1P0CG04 106 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 Q5BKY6 102 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 SFTA2Q6UW10 78 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 VAMP8Q9BV40 100 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 CDC42SE2Q9NRR3 84 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 MEGF8Q7Z7M0 2845 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
PCNX4-206ENST00000553513 ASXL3Q9C0F0 2248 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 ZNF236Q9UL36 1845 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 KDM5AP29375 1690 aaKnown RBP0.66□□□□□ -2.3
PCNX4-206ENST00000553513 A0A1B0GWA3 101 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 SEC11AP67812 179 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 FAM223AQ8IWN6 122 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 ACBD7Q8N6N7 88 aa0.66□□□□□ -2.3
PCNX4-206ENST00000553513 KDM3BQ7LBC6 1761 aa0.65□□□□□ -2.3
PCNX4-206ENST00000553513 M0R3E3 92 aa0.65□□□□□ -2.31
PCNX4-206ENST00000553513 GNGT2O14610 69 aa0.65□□□□□ -2.31
PCNX4-206ENST00000553513 FDCSPQ8NFU4 85 aa0.65□□□□□ -2.31
PCNX4-206ENST00000553513 APCP25054 2843 aa0.65□□□□□ -2.31
PCNX4-206ENST00000553513 TTC28Q96AY4 2481 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 PLXNB2O15031 1838 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 hADV29S1A0JD25 119 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 NDUFC1O43677 76 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 BCE1O60756 84 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 CFDP00746 253 aaPredicted RBP0.64□□□□□ -2.31
PCNX4-206ENST00000553513 LINC00032P0C843 101 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 UBE2D3P61077 147 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 UBE2D2P62837 147 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 TMEM263Q8WUH6 116 aaKnown RBP0.64□□□□□ -2.31
PCNX4-206ENST00000553513 PRO1933Q9H354 126 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 SPHKAPQ2M3C7 1700 aa0.64□□□□□ -2.31
PCNX4-206ENST00000553513 FRAS1Q86XX4 4008 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 MYOM1P52179 1685 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 SAA2P0DJI9 122 aaPredicted RBP0.63□□□□□ -2.31
PCNX4-206ENST00000553513 PIGYQ3MUY2 71 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 SHROOM2Q13796 1616 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 RAPGEF6Q8TEU7 1601 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 CNTLNQ9NXG0 1405 aa0.63□□□□□ -2.31
PCNX4-206ENST00000553513 CACNA1CQ13936 2221 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 BDP1A6H8Y1 2624 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 FXYD6-FXYD2A0A087WZ82 144 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 LINC00472Q9H8W2 130 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 TP53AIP1Q9HCN2 124 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 LRP6O75581 1613 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 ZFYVE16Q7Z3T8 1539 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 TET3O43151 1660 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 AHCTF1Q8WYP5 2266 aa0.62□□□□□ -2.31
PCNX4-206ENST00000553513 TRBV6-1A0A0K0K1D8 114 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 M0R143 59 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 KRTAP2-3P0C7H8 128 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 Q8IZM0 81 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 PMCHL2Q9BQD1 86 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 KRTAP2-4Q9BYR9 128 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
PCNX4-206ENST00000553513 TPRP12270 2363 aaKnown RBP0.61□□□□□ -2.31
PCNX4-206ENST00000553513 POLA1P09884 1462 aaPredicted RBP0.61□□□□□ -2.31
PCNX4-206ENST00000553513 CC2D2AQ9P2K1 1620 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 EHBP1L1Q8N3D4 1523 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 BTAF1O14981 1849 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 FAM223BA6NKX1 122 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 NCMAPQ5T1S8 102 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 TOP2BQ02880 1626 aa0.6□□□□□ -2.31
PCNX4-206ENST00000553513 C10orf142B7Z368 130 aa0.59□□□□□ -2.31
PCNX4-206ENST00000553513 MPC2O95563 127 aa0.59□□□□□ -2.31
PCNX4-206ENST00000553513 S100A8P05109 93 aa0.59□□□□□ -2.31
PCNX4-206ENST00000553513 DPY30Q9C005 99 aa0.59□□□□□ -2.31
PCNX4-206ENST00000553513 HMGXB3Q12766 1538 aa0.59□□□□□ -2.32
PCNX4-206ENST00000553513 ABCA3Q99758 1704 aa0.58□□□□□ -2.32
PCNX4-206ENST00000553513 ABCC5O15440 1437 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms