RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FHL2Q14192 279 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 KRTAP24-1Q3LI83 254 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 FAM19A3Q7Z5A8 133 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 PLEKHB2Q96CS7 222 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 TMEM101Q96IK0 257 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 CHAC1Q9BUX1 264 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 PRO0255Q9UI72 69 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 CUBNO60494 3623 aa5.18□□□□□ -1.58
ATXN3-221ENST00000553498 TRAV8-6A0A0B4J262 113 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 TMEM223A0PJW6 202 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 GAGE12JA6NER3 117 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 H3BRM9 83 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 LEPROTO15243 131 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 LINC00694P0DN24 101 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 GAGE4Q13068 117 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 GAGE5Q13069 117 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 GAGE13Q4V321 117 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 TMEM170BQ5T4T1 132 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 SH2D6Q7Z4S9 175 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 SBSPONQ8IVN8 264 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 RNF183Q96D59 192 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
ATXN3-221ENST00000553498 SONP18583 2426 aaKnown RBP5.16□□□□□ -1.58
ATXN3-221ENST00000553498 TLN2Q9Y4G6 2542 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 IGLV5-45A0A087WSX0 123 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 ZNF815PA8K554 130 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 J3QQQ9 107 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 UBE2L6O14933 153 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 IGHV4-30-4P0DP06 118 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 ZNF22P17026 224 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-221ENST00000553498 LGALS3P17931 250 aaKnown RBP5.16□□□□□ -1.58
ATXN3-221ENST00000553498 UBE2D1P51668 147 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 HERVK_113P63121 156 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 CEND1Q8N111 149 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 OR5A1Q8NGJ0 315 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 PHLDA1Q8WV24 401 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-221ENST00000553498 FAM104AQ969W3 186 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 SPANXB1Q9NS25 103 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-221ENST00000553498 COX11Q9Y6N1 276 aa5.16□□□□□ -1.58
ATXN3-221ENST00000553498 NSD1Q96L73 2696 aaPredicted RBP5.15□□□□□ -1.58
ATXN3-221ENST00000553498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-221ENST00000553498 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 TRBV6-8A0A0A6YYG3 113 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV3-38A0A0C4DH36 116 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 A0A0J9YXV3 536 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 IGKV2-29A2NJV5 120 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-221ENST00000553498 CCL25O15444 150 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 SPART-AS1P0CW21 52 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 DEFB130BP0DP73 79 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 DEFB130AP0DP74 79 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 AMMECR1LQ6DCA0 310 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 SCGB1D4Q6XE38 83 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 NTM-AS1Q6ZSK4 140 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
ATXN3-221ENST00000553498 TP73-AS1Q9UF72 201 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 Q9UF83 564 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 ACANP16112 2415 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 NF1P21359 2839 aa5.15□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV4-28A0A0C4DH34 117 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV1-58A0A0C4DH39 117 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 TAX1BP3O14907 124 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 ATP5G1P05496 136 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 SMIM13P0DJ93 91 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 PTTG1IPP53801 180 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 EMP1P54849 157 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 DEFB135Q30KP9 77 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 FAM222AQ5U5X8 452 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 Q6ZUT4 128 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 Q6ZVH6 145 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 MAPKAPK5-AS1Q8N8E1 139 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 Q8NAQ8 132 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 SPATA3Q8NHX4 192 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 HIST1H4GQ99525 98 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 OPRPNQ99935 248 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-221ENST00000553498 CDC42SE2Q9NRR3 84 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 HIVEP1P15822 2718 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 NOTCH2Q04721 2471 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 MUC4Q99102 2169 aa5.14□□□□□ -1.59
ATXN3-221ENST00000553498 A0A0J9YY99 117 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 A0A1B0GUV1 79 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 GCSHP23434 173 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 TCTAP57738 103 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 DAD1P61803 113 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 ATP6V0E2Q8NHE4 81 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 DEFB104AQ8WTQ1 72 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 VSIG2Q96IQ7 327 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 MTORP42345 2549 aa5.13□□□□□ -1.59
ATXN3-221ENST00000553498 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 TMEM238C9JI98 176 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 H3BNG1 76 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 TIMM17BO60830 172 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 IGHV3-30-3P0DP02 117 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 GYPEP15421 78 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 SRSF9Q13242 221 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-221ENST00000553498 CEMP1Q6PRD7 247 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-221ENST00000553498 SFTA2Q6UW10 78 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 Q8N1X5 172 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 LINC00469Q8N7U9 141 aa5.12□□□□□ -1.59
ATXN3-221ENST00000553498 TTTY13Q9BZ97 58 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms