RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 Q6ZUT4 128 aa12.15□□□□□ -0.46
PSEN1-206ENST00000553447 AMELXQ99217 191 aa12.15□□□□□ -0.46
PSEN1-206ENST00000553447 VCX2Q9H322 139 aa12.15□□□□□ -0.46
PSEN1-206ENST00000553447 ZNF25P17030 456 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-206ENST00000553447 TIRAPP58753 221 aa12.14□□□□□ -0.47
PSEN1-206ENST00000553447 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
PSEN1-206ENST00000553447 TRAV9-2A0A087WT02 112 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 DPM2O94777 84 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 IGKCP01834 107 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
PSEN1-206ENST00000553447 LELP1Q5T871 98 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 LYPD5Q6UWN5 251 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
PSEN1-206ENST00000553447 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
PSEN1-206ENST00000553447 PLNP26678 52 aa12.11□□□□□ -0.47
PSEN1-206ENST00000553447 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
PSEN1-206ENST00000553447 C15orf53Q8NAA6 179 aa12.11□□□□□ -0.47
PSEN1-206ENST00000553447 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
PSEN1-206ENST00000553447 IGLV4-69A0A075B6H9 119 aa12.1□□□□□ -0.47
PSEN1-206ENST00000553447 hDV102S1A0JD36 115 aa12.1□□□□□ -0.47
PSEN1-206ENST00000553447 ZNF664Q8N3J9 261 aa12.1□□□□□ -0.47
PSEN1-206ENST00000553447 C2orf88Q9BSF0 95 aa12.1□□□□□ -0.47
PSEN1-206ENST00000553447 TMEM262E9PQX1 116 aa12.09□□□□□ -0.47
PSEN1-206ENST00000553447 IGLV4-60A0A075B6I1 120 aa12.08□□□□□ -0.48
PSEN1-206ENST00000553447 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
PSEN1-206ENST00000553447 HSBP1L1C9JCN9 74 aa12.08□□□□□ -0.48
PSEN1-206ENST00000553447 SPATA45Q537H7 98 aa12.08□□□□□ -0.48
PSEN1-206ENST00000553447 MPV17L2Q567V2 206 aa12.08□□□□□ -0.48
PSEN1-206ENST00000553447 TRAV8-6A0A0B4J262 113 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 C11orf86A6NJI1 115 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 PKIAP61925 76 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 RBX1P62877 108 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 ESRGQ1W209 222 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 NFE4Q86UQ8 179 aa12.07□□□□□ -0.48
PSEN1-206ENST00000553447 A0A0J9YXV3 536 aa12.06□□□□□ -0.48
PSEN1-206ENST00000553447 IGLL5B9A064 214 aa12.06□□□□□ -0.48
PSEN1-206ENST00000553447 UBE2D1P51668 147 aa12.06□□□□□ -0.48
PSEN1-206ENST00000553447 STPG4Q8N801 248 aa12.06□□□□□ -0.48
PSEN1-206ENST00000553447 PRKDCP78527 4128 aaKnown RBP12.06□□□□□ -0.48
PSEN1-206ENST00000553447 CHAC1Q9BUX1 264 aa12.05□□□□□ -0.48
PSEN1-206ENST00000553447 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
PSEN1-206ENST00000553447 COL7A1Q02388 2944 aa12.05□□□□□ -0.48
PSEN1-206ENST00000553447 ANKRD39Q53RE8 183 aa12.04□□□□□ -0.48
PSEN1-206ENST00000553447 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
PSEN1-206ENST00000553447 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
PSEN1-206ENST00000553447 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
PSEN1-206ENST00000553447 WFDC10BQ8IUB3 73 aa12.02□□□□□ -0.49
PSEN1-206ENST00000553447 Q8N3U1 123 aa12.02□□□□□ -0.49
PSEN1-206ENST00000553447 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
PSEN1-206ENST00000553447 TSTD3H0UI37 97 aa12.01□□□□□ -0.49
PSEN1-206ENST00000553447 ZNF22P17026 224 aaPredicted RBP12.01□□□□□ -0.49
PSEN1-206ENST00000553447 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
PSEN1-206ENST00000553447 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
PSEN1-206ENST00000553447 TCTAP57738 103 aa12□□□□□ -0.49
PSEN1-206ENST00000553447 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
PSEN1-206ENST00000553447 IGKV3OR2-268A0A0C4DH90 116 aa11.99□□□□□ -0.49
PSEN1-206ENST00000553447 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
PSEN1-206ENST00000553447 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
PSEN1-206ENST00000553447 SEC11AP67812 179 aa11.99□□□□□ -0.49
PSEN1-206ENST00000553447 IGLV5-45A0A087WSX0 123 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 CCL18P55774 89 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 HERVK_113P61574 105 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 HERVK_113P63121 156 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 MRPS16Q9Y3D3 137 aaKnown RBP11.98□□□□□ -0.49
PSEN1-206ENST00000553447 LINC00588Q9Y4M8 146 aa11.98□□□□□ -0.49
PSEN1-206ENST00000553447 IGKV2D-26A0A0A0MRZ7 120 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 LINC00959A0A1B0GUT2 108 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 TMEM223A0PJW6 202 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 IGHV3-33P01772 117 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 IGHV3-30-3P0DP02 117 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 COX6A2Q02221 97 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 CLPSL2Q6UWE3 100 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 LINC00469Q8N7U9 141 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 APLNQ9ULZ1 77 aa11.97□□□□□ -0.49
PSEN1-206ENST00000553447 PCP4L1A6NKN8 68 aa11.96□□□□□ -0.49
PSEN1-206ENST00000553447 E9PLD3 99 aa11.96□□□□□ -0.49
PSEN1-206ENST00000553447 NMUP48645 174 aa11.96□□□□□ -0.49
PSEN1-206ENST00000553447 KLK5Q9Y337 293 aaPredicted RBP11.96□□□□□ -0.49
PSEN1-206ENST00000553447 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.5
PSEN1-206ENST00000553447 COX8AP10176 69 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 REG3AQ06141 175 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 SS18Q15532 418 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 LINC01556Q5JQF7 62 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 UQCR10Q9UDW1 63 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
PSEN1-206ENST00000553447 H3BRM9 83 aa11.94□□□□□ -0.5
PSEN1-206ENST00000553447 CCL25O15444 150 aa11.94□□□□□ -0.5
PSEN1-206ENST00000553447 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
PSEN1-206ENST00000553447 DYNC2H1Q8NCM8 4307 aaKnown RBP11.93□□□□□ -0.5
PSEN1-206ENST00000553447 DNAH10OSP0CZ25 163 aa11.93□□□□□ -0.5
PSEN1-206ENST00000553447 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
PSEN1-206ENST00000553447 PRR34Q9NV39 138 aa11.93□□□□□ -0.5
PSEN1-206ENST00000553447 SLC25A34Q6PIV7 304 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms