RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 UBE2D1P51668 147 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 FGF12P61328 243 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 RPL38P63173 70 aaKnown RBP1.31□□□□□ -2.2
NPAS3-212ENST00000552696 SOSTDC1Q6X4U4 206 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 ZNF818PQ6ZRF7 136 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 VMO1Q7Z5L0 202 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 CLECL1Q8IZS7 167 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 C20orf197Q8N268 126 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 LINC00269Q8N2A0 174 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 MUC7Q8TAX7 377 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 ZCCHC13Q8WW36 166 aaKnown RBP1.31□□□□□ -2.2
NPAS3-212ENST00000552696 TMEM141Q96I45 108 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 LINC00467Q9BRT7 94 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 V9GYV3 84 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 NHSQ6T4R5 1651 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 ZNF236Q9UL36 1845 aa1.31□□□□□ -2.2
NPAS3-212ENST00000552696 KIAA1549Q9HCM3 1950 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 HEATR1Q9H583 2144 aaKnown RBP1.3□□□□□ -2.2
NPAS3-212ENST00000552696 RICTORQ6R327 1708 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 DOT1LQ8TEK3 1739 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
NPAS3-212ENST00000552696 TRBV7-3A0A075B6L6 115 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 A0A1B0GU33 70 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 TMEM30CPA0ZSE6 113 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 C17orf98A8MV24 154 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 F8WEM9 126 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 C3orf84H3BNL1 204 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 LEPROTO15243 131 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 ERC2-IT1O76042 136 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 PPP1R17O96001 155 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 IGHV1-69P01742 117 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 IGHV3-30-3P0DP02 117 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 NPPCP23582 126 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 EDDM3BP56851 147 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 SUPT4H1P63272 117 aaKnown RBP1.3□□□□□ -2.2
NPAS3-212ENST00000552696 FAM223AQ8IWN6 122 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 DYNAPQ8N1N2 210 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 Q8NAQ8 132 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 RNASE6Q93091 150 aaKnown RBP1.3□□□□□ -2.2
NPAS3-212ENST00000552696 NABP2Q9BQ15 211 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 SIP14410 1827 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 OBSL1O75147 1896 aa1.3□□□□□ -2.2
NPAS3-212ENST00000552696 NCOA6Q14686 2063 aaPredicted RBP1.3□□□□□ -2.2
NPAS3-212ENST00000552696 DEPDC5O75140 1603 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 LRP6O75581 1613 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 LTBP4Q8N2S1 1624 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TNS1Q9HBL0 1735 aaKnown RBP1.29□□□□□ -2.2
NPAS3-212ENST00000552696 PAPPA2Q9BXP8 1791 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 PLXNB3Q9ULL4 1909 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TANC2Q9HCD6 1990 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 IGLV3-32A0A0A0MS00 114 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TRBV30A0A0K0K1B3 111 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 FAM223BA6NKX1 122 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 A6NN06 94 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 MIFP14174 115 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 KISS1Q15726 138 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 FAM229BQ4G0N7 80 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 PATE2Q6UY27 113 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 CASC2Q6XLA1 102 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 Q8N6K4 173 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 CCL4L1Q8NHW4 92 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 FAM167A-AS1Q96KT0 104 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 WFDC6Q9BQY6 131 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TMEM167BQ9NRX6 74 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 LINC00474Q9P2X8 69 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 NDUFA12Q9UI09 145 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TIMM8BQ9Y5J9 83 aaPredicted RBP1.29□□□□□ -2.2
NPAS3-212ENST00000552696 MINOS1-NBL1R4GNA1 71 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 TIAM2Q8IVF5 1701 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 COL18A1P39060 1754 aa1.29□□□□□ -2.2
NPAS3-212ENST00000552696 GREB1Q4ZG55 1949 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 SPTBP11277 2137 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 GOLGA4Q13439 2230 aaKnown RBP1.28□□□□□ -2.2
NPAS3-212ENST00000552696 A0A0J9YX75 114 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 SDHAF1A6NFY7 115 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 HIGD1CA8MV81 97 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 D6R8Y8 96 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 HCG22E2RYF7 251 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 H3BPC8 53 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 SPINK4O60575 86 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 IGKV1-16P04430 117 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 SPINT3P49223 89 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 C9orf116Q5BN46 136 aaPredicted RBP1.28□□□□□ -2.2
NPAS3-212ENST00000552696 SFTA2Q6UW10 78 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 LYPD5Q6UWN5 251 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 RPS27LQ71UM5 84 aaKnown RBP1.28□□□□□ -2.2
NPAS3-212ENST00000552696 MUSTN1Q8IVN3 82 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 CNEP1R1Q8N9A8 125 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 CYSTM1Q9H1C7 97 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 C11orf1Q9H5F2 150 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 CDC42SE1Q9NRR8 79 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 PSENENQ9NZ42 101 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 UBE2D4Q9Y2X8 147 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 NRAPQ86VF7 1730 aa1.28□□□□□ -2.2
NPAS3-212ENST00000552696 NRXN2Q9P2S2 1712 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms