RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 GNB1LQ9BYB4 327 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 MAP1LC3AQ9H492 121 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 DPH3P1Q9H4G8 78 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 ST20Q9HBF5 79 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 NXT2Q9NPJ8 142 aaKnown RBP0.98□□□□□ -2.25
LIMA1-209ENST00000552008 IL36BQ9NZH7 164 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 UQCR10Q9UDW1 63 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 PSORS1C2Q9UIG4 136 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 HSPB8Q9UJY1 196 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 HLA-DRB4X5D2U9 266 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 CFAP54Q96N23 3096 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 SPTBN5Q9NRC6 3674 aaKnown RBP0.98□□□□□ -2.25
LIMA1-209ENST00000552008 NCOR1O75376 2440 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 MPDZO75970 2070 aa0.98□□□□□ -2.25
LIMA1-209ENST00000552008 TNRC6AQ8NDV7 1962 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ASCC3Q8N3C0 2202 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 FRYLO94915 3013 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 RIF1Q5UIP0 2472 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 HIVEP2P31629 2446 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 FAM186AA6NE01 2351 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 CEP295Q9C0D2 2601 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 NINQ8N4C6 2090 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 BRWD1Q9NSI6 2320 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TRBV20OR9-2A0A075B6H5 130 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TRGV1A0A0A0MS02 117 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TRAV5A0A0B4J249 113 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TRBV10-1A0A0K0K1A3 114 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 NUPR2A6NF83 97 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 HIGD1CA8MV81 97 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF705FA8MVS1 300 aaPredicted RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 E7EUB6 86 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 F5H768 121 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 H3BRM9 83 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 I3L3M4 83 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 M0R381 172 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 APOMO95445 188 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 NCR2O95944 276 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 CRPP02741 224 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 MGPP08493 103 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 SRP19P09132 144 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ARMS2P0C7Q2 107 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF705DP0CH99 300 aaPredicted RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 DEFB130BP0DP73 79 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 DEFB130AP0DP74 79 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 PYYP10082 97 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 EVI2AP22794 236 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 IFI27P40305 119 aaPredicted RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 EMP1P54849 157 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 FOXA3P55318 350 aaPredicted RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 NDUFA6P56556 154 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 LINC00313P59037 77 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 JOSD1Q15040 202 aaPredicted RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 RHOHQ15669 191 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ZNF56Q15929 161 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 DEFB136Q30KP8 78 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 Q5BKY6 102 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 PATE2Q6UY27 113 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 UBE2DNLQ8IWF7 75 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 C10orf126Q8N4M7 172 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 FAM24BQ8N5W8 94 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 C15orf53Q8NAA6 179 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 Q8NDZ9 215 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 OR11H2Q8NH07 326 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 OR10AG1Q8NH19 301 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM263Q8WUH6 116 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 CHCHD1Q96BP2 118 aaKnown RBP0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM141Q96I45 108 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 LINC00467Q9BRT7 94 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 UPK3BQ9BT76 320 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TMEM191AQ9H0A3 160 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 AGPAT4-IT1Q9H0P7 198 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 C11orf1Q9H5F2 150 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 LAMTOR3Q9UHA4 124 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 PRO0255Q9UI72 69 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 HHLA3Q9XRX5 114 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 CYSLTR1Q9Y271 337 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 CUL9Q8IWT3 2517 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 SDK1Q7Z5N4 2213 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 ASXL3Q9C0F0 2248 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 EML5Q05BV3 1969 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 EYSQ5T1H1 3165 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 RP1P56715 2156 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 NCKAP5O14513 1909 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 TRIOO75962 3097 aa0.97□□□□□ -2.25
LIMA1-209ENST00000552008 REV3LO60673 3130 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRBV7-3A0A075B6L6 115 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRBV25-1A0A075B6N4 114 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 IGKV2-40A0A087WW87 121 aaPredicted RBP0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TMSB15BA0A087X1C1 80 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRAV10A0A0B4J240 114 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRAV4A0A0B4J268 109 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 IGHV1-24A0A0C4DH33 117 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 A0A1B0GV90 55 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TINCRA0A1B0GVN0 87 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 SMIM27A0A1W2PRY6 76 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 C19orf71A6NCJ1 209 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 C11orf86A6NJI1 115 aa0.96□□□□□ -2.26
LIMA1-209ENST00000552008 H3BNG1 76 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms