RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TRAV8-4A0A0B4J246 113 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 LRCOL1A6NCL2 159 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 C16orf90A8MZG2 172 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 GHRHP01286 108 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 NPYP01303 97 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 ZNF25P17030 456 aaPredicted RBP7.06□□□□□ -1.28
PTCH1-225ENST00000551845 RAB5AP20339 215 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
PTCH1-225ENST00000551845 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 CDK2AP2O75956 126 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 HLA-DQA1P01909 254 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 CLPSL2Q6UWE3 100 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 BAALCQ8WXS3 180 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
PTCH1-225ENST00000551845 LOC389332A0A1B0GUA5 103 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 KRTAP10-2P60368 255 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 Q8N1X5 172 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 OR5A1Q8NGJ0 315 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
PTCH1-225ENST00000551845 IGKV3OR2-268A0A0C4DH90 116 aa7.03□□□□□ -1.28
PTCH1-225ENST00000551845 KIAA1644Q3SXP7 199 aa7.03□□□□□ -1.28
PTCH1-225ENST00000551845 MRPL52Q86TS9 123 aaKnown RBP7.03□□□□□ -1.28
PTCH1-225ENST00000551845 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
PTCH1-225ENST00000551845 Q8N814 137 aa7.03□□□□□ -1.28
PTCH1-225ENST00000551845 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
PTCH1-225ENST00000551845 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
PTCH1-225ENST00000551845 IGLV10-54A0A075B6I4 117 aa7.02□□□□□ -1.29
PTCH1-225ENST00000551845 MT-ND6P03923 174 aa7.02□□□□□ -1.29
PTCH1-225ENST00000551845 Q8N8P6 123 aa7.02□□□□□ -1.29
PTCH1-225ENST00000551845 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
PTCH1-225ENST00000551845 IGLV5-52A0A0A0MRZ9 124 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 LECT2O14960 151 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 FABP9Q0Z7S8 132 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 C14orf177Q52M58 125 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 TIMM21Q9BVV7 248 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
PTCH1-225ENST00000551845 TGIF2-C20orf24A0A0A6YYL0 155 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 K7EMI3 77 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 G0S2P27469 103 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 WFDC2Q14508 124 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 SS18Q15532 418 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 PRSS3P2Q8NHM4 247 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
PTCH1-225ENST00000551845 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
PTCH1-225ENST00000551845 TRAPPC1Q9Y5R8 145 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 HERC1Q15751 4861 aa7□□□□□ -1.29
PTCH1-225ENST00000551845 LINC00959A0A1B0GUT2 108 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 CCL25O15444 150 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 GCSHP23434 173 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 FUSP35637 526 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTCH1-225ENST00000551845 IFI27P40305 119 aaPredicted RBP6.99□□□□□ -1.29
PTCH1-225ENST00000551845 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 KRTAP26-1Q6PEX3 210 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
PTCH1-225ENST00000551845 ALKBH7Q9BT30 221 aaPredicted RBP6.99□□□□□ -1.29
PTCH1-225ENST00000551845 SMCO4Q9NRQ5 59 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 SPANXA1Q9NS26 97 aa6.99□□□□□ -1.29
PTCH1-225ENST00000551845 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.98□□□□□ -1.29
PTCH1-225ENST00000551845 C1orf196B1AJZ1 125 aa6.98□□□□□ -1.29
PTCH1-225ENST00000551845 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
PTCH1-225ENST00000551845 RPL39P62891 51 aaKnown RBP6.98□□□□□ -1.29
PTCH1-225ENST00000551845 CYSLTR1Q9Y271 337 aa6.97□□□□□ -1.29
PTCH1-225ENST00000551845 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
PTCH1-225ENST00000551845 LRP1BQ9NZR2 4599 aa6.97□□□□□ -1.29
PTCH1-225ENST00000551845 TRAV13-1A0A0B4J241 112 aa6.96□□□□□ -1.3
PTCH1-225ENST00000551845 XCL1P47992 114 aa6.96□□□□□ -1.3
PTCH1-225ENST00000551845 MRPS36P82909 103 aaKnown RBP6.96□□□□□ -1.3
PTCH1-225ENST00000551845 CD164L2Q6UWJ8 174 aa6.96□□□□□ -1.3
PTCH1-225ENST00000551845 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
PTCH1-225ENST00000551845 PRSS1P07477 247 aa6.95□□□□□ -1.3
PTCH1-225ENST00000551845 INAFM2P0DMQ5 153 aa6.95□□□□□ -1.3
PTCH1-225ENST00000551845 RNASE13Q5GAN3 156 aaKnown RBP6.95□□□□□ -1.3
PTCH1-225ENST00000551845 OPRPNQ99935 248 aaPredicted RBP6.95□□□□□ -1.3
PTCH1-225ENST00000551845 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
PTCH1-225ENST00000551845 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 KRTAP10-1P60331 282 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 FOXI1Q12951 378 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 Q6ZUT4 128 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 VCX2Q9H322 139 aa6.94□□□□□ -1.3
PTCH1-225ENST00000551845 APOBP04114 4563 aaKnown RBP6.94□□□□□ -1.3
PTCH1-225ENST00000551845 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 LINC01549A6NIU2 74 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 NPSP0C0P6 89 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 MALP21145 153 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 PAPPA-AS1Q5QFB9 102 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 Q6ZN92 141 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 CBLN2Q8IUK8 224 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 TMEM141Q96I45 108 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 YPEL4Q96NS1 127 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
PTCH1-225ENST00000551845 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.92□□□□□ -1.3
PTCH1-225ENST00000551845 IGHV1-58A0A0C4DH39 117 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms