RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 AKAIN1P0CW23 69 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 S100A4P26447 101 aaKnown RBP1.17□□□□□ -2.22
PTCH1-223ENST00000551623 CTRLP40313 264 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 RAB5CP51148 216 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 TMBIM6P55061 237 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 UBE2L3P68036 154 aaKnown RBP1.17□□□□□ -2.22
PTCH1-223ENST00000551623 IL18Q14116 193 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 SMUG1Q53HV7 270 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 GCSAMLQ5JQS6 135 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 SPANXN2Q5MJ10 180 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 FAM74A1Q5RGS3 127 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 COX6B2Q6YFQ2 88 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 GOLT1AQ6ZVE7 132 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 MIR17HGQ75NE6 70 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 OR2D3Q8NGH3 330 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 OR10D4PQ8NGN7 298 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 DEDD2Q8WXF8 326 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 FAM210AQ96ND0 272 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 BCL7BQ9BQE9 202 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 NPCDR1Q9BY65 106 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 SMDT1Q9H4I9 107 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 KCNIP2Q9NS61 270 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 TP73-AS1Q9UF72 201 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 SCP2D1Q9UJQ7 156 aa1.17□□□□□ -2.22
PTCH1-223ENST00000551623 KMT2DO14686 5537 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 B4DEV8 164 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 H3BMQ9 156 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 M0R381 172 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 SNAI2O43623 268 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 OR7C2O60412 319 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 SFT2D2O95562 160 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 NCR2O95944 276 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 TPT1P13693 172 aaKnown RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 RPL12P30050 165 aaKnown RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 S100A11P31949 105 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 SULT1A1P50225 295 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 UBE2BP63146 152 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 FLI1Q01543 452 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 ZNF56Q15929 161 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 ATP6V1FQ16864 119 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 TMEM241Q24JQ0 296 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 IAH1Q2TAA2 248 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 KHDC3LQ587J8 217 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 FAM19A5Q7Z5A7 132 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 MRPL52Q86TS9 123 aaKnown RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 CLVS1Q8IUQ0 354 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 CMTM2Q8TAZ6 248 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 CAMK2N2Q96S95 79 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 SDHCQ99643 169 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 SLC25A21Q9BQT8 299 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 ZNF471Q9BX82 626 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 MRPS26Q9BYN8 205 aaKnown RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 NMES1Q9C002 83 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 VCXQ9H320 206 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 GSKIPQ9P0R6 139 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 NDUFA12Q9UI09 145 aa1.16□□□□□ -2.22
PTCH1-223ENST00000551623 FLGP20930 4061 aaPredicted RBP1.16□□□□□ -2.22
PTCH1-223ENST00000551623 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 NDUFC2-KCTD14E9PQ53 114 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 K7EQM0 130 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 COX7A2LO14548 114 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 HPGDSO60760 199 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 NTF3P20783 257 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 XCL1P47992 114 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 CRIP1P50238 77 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 TAS2R45P59539 299 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 HBG1P69891 147 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 HBG2P69892 147 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 BAXQ07812 192 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 IL15RAQ13261 267 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 PPP1R1AQ13522 171 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 COTL1Q14019 142 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 C9orf129Q5T035 196 aaKnown RBP1.15□□□□□ -2.23
PTCH1-223ENST00000551623 C3orf22Q8N5N4 141 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 OR10AG1Q8NH19 301 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 HYLS1Q96M11 299 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 AP1S3Q96PC3 154 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 NIT2Q9NQR4 276 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 CYTL1Q9NRR1 136 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 MBD2Q9UBB5 411 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 EPDR1Q9UM22 224 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 UBE2D4Q9Y2X8 147 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 CSDC2Q9Y534 153 aaKnown RBP1.15□□□□□ -2.23
PTCH1-223ENST00000551623 ARL2-SNX15V9GYD0 113 aa1.15□□□□□ -2.23
PTCH1-223ENST00000551623 IGLV4-3A0A075B6K6 122 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 IGHV3OR16-9A0A0B4J2B5 98 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 TRBV30A0A0K0K1B3 111 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 IGSF23A1L1A6 192 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 C9orf170A2RU37 121 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 C1orf196B1AJZ1 125 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 UBE2L6O14933 153 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 SLC25A20O43772 301 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 SH2D1AO60880 128 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 CST7O76096 145 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 TGFBR1P36897 503 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 AQP4P55087 323 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 GNG5P63218 68 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 KIAA0087Q14695 138 aa1.14□□□□□ -2.23
PTCH1-223ENST00000551623 LBHQ53QV2 105 aaPredicted RBP1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms