RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 RPL19P84098 196 aaKnown RBP1.34□□□□□ -2.19
CPSF6-207ENST00000551516 ATP6V1FQ16864 119 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 Q5W150 140 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 SPINK6Q6UWN8 80 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 ZNF664Q8N3J9 261 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TOMM5Q8N4H5 51 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 RNASE11Q8TAA1 199 aaKnown RBP1.34□□□□□ -2.19
CPSF6-207ENST00000551516 C2orf50Q96LR7 162 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 PFDN5Q99471 154 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 SEC22CQ9BRL7 303 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 OTORQ9NRC9 128 aa1.34□□□□□ -2.19
CPSF6-207ENST00000551516 TRBV7-3A0A075B6L6 115 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 A0A087WWC5 75 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 A0A096LNI7 61 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
CPSF6-207ENST00000551516 TRAV8-6A0A0B4J262 113 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 PIGBOS1A0A0B4J2F0 54 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 NAP1L6A6NFF2 107 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 M0QY20 66 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 PSPHP1O15172 72 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 SCO1O75880 301 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 GCGP01275 180 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 S100A9P06702 114 aaKnown RBP1.33□□□□□ -2.2
CPSF6-207ENST00000551516 IL7P13232 177 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 S100A7P31151 101 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 COX19Q49B96 90 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 Q5BKY6 102 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 RNASE13Q5GAN3 156 aaKnown RBP1.33□□□□□ -2.2
CPSF6-207ENST00000551516 OR10J3Q5JRS4 329 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 TMEM78Q5T7P6 136 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 GOLT1AQ6ZVE7 132 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 OR2T35Q8NGX2 323 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 UBE2WQ96B02 151 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 ZC2HC1AQ96GY0 325 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 PRADC1Q9BSG0 188 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 MED28Q9H204 178 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 Q9H521 79 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 VCX3AQ9NNX9 186 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 TREM1Q9NP99 234 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 C8orf17Q9NRJ1 99 aa1.33□□□□□ -2.2
CPSF6-207ENST00000551516 UBE2L5PA0A1B0GUS4 154 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 A8MWV9 139 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 RGS5O15539 181 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 PSCAO43653 123 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 SIX6O95475 246 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 PTTG1O95997 202 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 LTAP01374 205 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 CXCL1P09341 107 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 OR5AL1P0C617 328 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 ARMS2P0C7Q2 107 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 IGLC6P0CF74 106 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 RAB2AP61019 212 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 COX6A2Q02221 97 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 Q0VG73 95 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 MIAQ16674 131 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 C6orf99Q4VX62 202 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 SLC7A5P1Q8MH63 180 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 LINC00269Q8N2A0 174 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 C12orf45Q8N5I9 185 aaPredicted RBP1.32□□□□□ -2.2
CPSF6-207ENST00000551516 MCFD2Q8NI22 146 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 ENKURQ8TC29 256 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 LRRC20Q8TCA0 184 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 ASB13Q8WXK3 278 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 KCNS1Q96KK3 526 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 CNFNQ9BYD5 112 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 MRPS26Q9BYN8 205 aaKnown RBP1.32□□□□□ -2.2
CPSF6-207ENST00000551516 NMES1Q9C002 83 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 GSKIPQ9P0R6 139 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 PAIP2BQ9ULR5 123 aaKnown RBP1.32□□□□□ -2.2
CPSF6-207ENST00000551516 EPDR1Q9UM22 224 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 TIMM9Q9Y5J7 89 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 ARL2-SNX15V9GYD0 113 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 V9GYY9 64 aa1.32□□□□□ -2.2
CPSF6-207ENST00000551516 MACF1Q9UPN3 7388 aaKnown RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 TRBV20OR9-2A0A075B6H5 130 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 IGLV10-54A0A075B6I4 117 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 TRAV8-4A0A0B4J246 113 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 A0A0D9SG52 128 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 A0A1W2PRE2 83 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 C19orf71A6NCJ1 209 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 LYRM1O43325 122 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 GATCO43716 136 aaKnown RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 NDUFS6O75380 124 aaKnown RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 MPC2O95563 127 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 P01737 135 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 ARL14EPLP0DKL9 152 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 ESDP10768 282 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 ATP6V0CP27449 155 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 GCHFRP30047 84 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 PSMB2P49721 201 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 AP3S2P59780 193 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 RAB4BP61018 213 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 MT1HP80294 61 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 FLI1Q01543 452 aaPredicted RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 MEF2BQ02080 365 aaPredicted RBP1.31□□□□□ -2.2
CPSF6-207ENST00000551516 BAXQ07812 192 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 VAMP3Q15836 100 aa1.31□□□□□ -2.2
CPSF6-207ENST00000551516 KRTAP13-2Q52LG2 175 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms