RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 F2Z2F3 143 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 SNAI2O43623 268 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 OR5AL1P0C617 328 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 FER1L6-AS1Q8NA97 138 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 V9GYV3 84 aa7.24□□□□□ -1.25
PTCH1-222ENST00000551425 MT-ND4LP03901 98 aa7.23□□□□□ -1.25
PTCH1-222ENST00000551425 IGLC6P0CF74 106 aa7.23□□□□□ -1.25
PTCH1-222ENST00000551425 TSKUQ8WUA8 353 aa7.23□□□□□ -1.25
PTCH1-222ENST00000551425 TPPP3Q9BW30 176 aa7.23□□□□□ -1.25
PTCH1-222ENST00000551425 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
PTCH1-222ENST00000551425 FOXA3P55318 350 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-222ENST00000551425 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
PTCH1-222ENST00000551425 LYZL1Q6UWQ5 148 aa7.22□□□□□ -1.25
PTCH1-222ENST00000551425 IGLV1-50A0A075B6I6 118 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 F5H697 171 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 APOC3P02656 99 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 SVBPQ8N300 66 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 DIRC1Q969H9 104 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 BORCS7Q96B45 105 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 TMEM243Q9BU79 118 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 CTDSP1Q9GZU7 261 aa7.21□□□□□ -1.26
PTCH1-222ENST00000551425 SMIM27A0A1W2PRY6 76 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 HIGD1CA8MV81 97 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 SNAPINO95295 136 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 MT-ND6P03923 174 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 CTRLP40313 264 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 RHEBQ15382 184 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 PGLYRP4Q96LB8 373 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 NAT8BQ9UHF3 227 aa7.2□□□□□ -1.26
PTCH1-222ENST00000551425 MUC21A0A140T8X8 626 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 C7orf77A4D0Y5 90 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 NTF3P20783 257 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 PTTG1IPP53801 180 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 SSTP61278 116 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 NUP35Q8NFH5 326 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 CNFNQ9BYD5 112 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
PTCH1-222ENST00000551425 A0A1B0GUT8 65 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 TRGC1P0CF51 173 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 SMIM17P0DL12 118 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 RIGQ13278 110 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 TWIST1Q15672 202 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 SMIM15Q7Z3B0 74 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 CARD19Q96LW7 228 aa7.18□□□□□ -1.26
PTCH1-222ENST00000551425 A0A1W2PNN7 141 aa7.17□□□□□ -1.26
PTCH1-222ENST00000551425 H0Y9J4 135 aa7.17□□□□□ -1.26
PTCH1-222ENST00000551425 M0QY20 66 aa7.17□□□□□ -1.26
PTCH1-222ENST00000551425 CHCHD10Q8WYQ3 142 aaPredicted RBP7.17□□□□□ -1.26
PTCH1-222ENST00000551425 AP1S3Q96PC3 154 aa7.17□□□□□ -1.26
PTCH1-222ENST00000551425 IGLV7-43P04211 117 aa7.16□□□□□ -1.26
PTCH1-222ENST00000551425 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
PTCH1-222ENST00000551425 S100PP25815 95 aa7.16□□□□□ -1.26
PTCH1-222ENST00000551425 AMTP48728 403 aa7.16□□□□□ -1.26
PTCH1-222ENST00000551425 IGKV3OR2-268A0A0C4DH90 116 aa7.15□□□□□ -1.26
PTCH1-222ENST00000551425 A0A1B0GW15 77 aa7.15□□□□□ -1.26
PTCH1-222ENST00000551425 UBE2L6O14933 153 aa7.15□□□□□ -1.26
PTCH1-222ENST00000551425 RPL13AP40429 203 aaKnown RBP7.15□□□□□ -1.26
PTCH1-222ENST00000551425 FOXI1Q12951 378 aa7.15□□□□□ -1.26
PTCH1-222ENST00000551425 BTF3L4Q96K17 158 aa7.15□□□□□ -1.26
PTCH1-222ENST00000551425 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
PTCH1-222ENST00000551425 S100A8P05109 93 aa7.14□□□□□ -1.27
PTCH1-222ENST00000551425 SYCNQ0VAF6 134 aa7.14□□□□□ -1.27
PTCH1-222ENST00000551425 ATP5L2Q7Z4Y8 100 aa7.14□□□□□ -1.27
PTCH1-222ENST00000551425 LINC00526Q96FQ7 95 aa7.14□□□□□ -1.27
PTCH1-222ENST00000551425 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 LOC107984640A0A0U1RRK4 108 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 UBE2D1P51668 147 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 HBBP68871 147 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 GAGE2BQ13066 116 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 C9orf116Q5BN46 136 aaPredicted RBP7.13□□□□□ -1.27
PTCH1-222ENST00000551425 MRPL54Q6P161 138 aaKnown RBP7.13□□□□□ -1.27
PTCH1-222ENST00000551425 TMEM191AQ9H0A3 160 aa7.13□□□□□ -1.27
PTCH1-222ENST00000551425 MGPP08493 103 aa7.12□□□□□ -1.27
PTCH1-222ENST00000551425 CAMPP49913 170 aa7.12□□□□□ -1.27
PTCH1-222ENST00000551425 SUMO4Q6EEV6 95 aa7.12□□□□□ -1.27
PTCH1-222ENST00000551425 RASL11AQ6T310 242 aa7.12□□□□□ -1.27
PTCH1-222ENST00000551425 PHF5AQ7RTV0 110 aaKnown RBP7.12□□□□□ -1.27
PTCH1-222ENST00000551425 A0A1B0GXF2 115 aa7.11□□□□□ -1.27
PTCH1-222ENST00000551425 S100A1P23297 94 aa7.11□□□□□ -1.27
PTCH1-222ENST00000551425 COTL1Q14019 142 aa7.11□□□□□ -1.27
PTCH1-222ENST00000551425 GATD1Q8NB37 220 aa7.11□□□□□ -1.27
PTCH1-222ENST00000551425 ZNF561-AS1K7EIQ3 104 aa7.1□□□□□ -1.27
PTCH1-222ENST00000551425 FGF6P10767 208 aa7.1□□□□□ -1.27
PTCH1-222ENST00000551425 SMCO4Q9NRQ5 59 aa7.1□□□□□ -1.27
PTCH1-222ENST00000551425 RAB4AP20338 218 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 XCL1P47992 114 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 COX19Q49B96 90 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 FAM104BQ5XKR9 115 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 AMN1Q8IY45 258 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 NIT2Q9NQR4 276 aa7.09□□□□□ -1.27
PTCH1-222ENST00000551425 TRBV24-1A0A075B6N3 115 aa7.08□□□□□ -1.28
PTCH1-222ENST00000551425 ATP6V1G1O75348 118 aa7.08□□□□□ -1.28
PTCH1-222ENST00000551425 TSPAN13O95857 204 aa7.08□□□□□ -1.28
PTCH1-222ENST00000551425 AMMECR1LQ6DCA0 310 aa7.08□□□□□ -1.28
PTCH1-222ENST00000551425 MRAP2Q96G30 205 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms