RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 RBMY1BA6NDE4 496 aaKnown RBP3.14□□□□□ -1.91
CCDC59-204ENST00000550589 RBMY1EA6NEQ0 496 aaKnown RBP3.14□□□□□ -1.91
CCDC59-204ENST00000550589 G3V4G9 280 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 H3BMG7 143 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 IGLV1-51P01701 117 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-30P01768 117 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 RBMY1DP0C7P1 496 aaKnown RBP3.14□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-30-3P0DP02 117 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-30-5P0DP03 117 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 IFITM1P13164 125 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 PLA2G2AP14555 144 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 PCP4P48539 62 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 C11orf44Q8N8P7 122 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 RNF183Q96D59 192 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
CCDC59-204ENST00000550589 GTSF1LQ9H1H1 148 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 NDUFA12Q9UI09 145 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 ERG28Q9UKR5 140 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 PTPN13Q12923 2485 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 TIMM17BO60830 172 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 PRSS2P07478 247 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 PSMB2P49721 201 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 DEFB104AQ8WTQ1 72 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 VSIG2Q96IQ7 327 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 FLNCQ14315 2725 aa3.14□□□□□ -1.91
CCDC59-204ENST00000550589 MUC4Q99102 2169 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 A0A0J9YXY3 114 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 HERV-K104P63124 156 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 Q1RN00 199 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 SFTA2Q6UW10 78 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 C1orf158Q8N1D5 194 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 ATP6V0E2Q8NHE4 81 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
CCDC59-204ENST00000550589 ESM1Q9NQ30 184 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.13□□□□□ -1.91
CCDC59-204ENST00000550589 IGKV2-29A2NJV5 120 aaPredicted RBP3.13□□□□□ -1.91
CCDC59-204ENST00000550589 SMIM9A6NGZ8 99 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 TSPAN13O95857 204 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 CFC1P0CG37 223 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 PROK1P58294 105 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 UBE2D3P61077 147 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 UBE2D2P62837 147 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 ATXN8Q156A1 80 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 ZFAND6Q6FIF0 208 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 OVOL2Q9BRP0 275 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 TMEM243Q9BU79 118 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 SPANXDQ9BXN6 97 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 NOP10Q9NPE3 64 aaKnown RBP3.13□□□□□ -1.91
CCDC59-204ENST00000550589 SPANXCQ9NY87 97 aa3.13□□□□□ -1.91
CCDC59-204ENST00000550589 DOPEY2Q9Y3R5 2298 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 UBR5O95071 2799 aaPredicted RBP3.12□□□□□ -1.91
CCDC59-204ENST00000550589 USP24Q9UPU5 2620 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-64A0A075B6Q5 118 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 IGLV5-45A0A087WSX0 123 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-38A0A0C4DH36 116 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 A4D1N5 150 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 TMEM262E9PQX1 116 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 FHL2Q14192 279 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 FAM19A3Q7Z5A8 133 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 MUSTN1Q8IVN3 82 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
CCDC59-204ENST00000550589 TRBV30A0A0K0K1B3 111 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 M0QXV9 152 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 NDUFA1O15239 70 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 TSPEAR-AS2P59090 65 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 MIAQ16674 131 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 ETDBQ3ZM63 59 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 C9orf66Q5T8R8 295 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 Q6ZTI0 123 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 Q6ZUT4 128 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 SIGMAR1Q99720 223 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 CR1P17927 2039 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 ZFYVE26Q68DK2 2539 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 TEX48A0A1B0GUV7 120 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE12JA6NER3 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 B5MCH6 92 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE7O76087 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 SPINK8P0C7L1 97 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE12FP0CL80 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE12GP0CL81 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE12IP0CL82 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 RPL35AP18077 110 aaKnown RBP3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE4Q13068 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 GAGE5Q13069 117 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 WFDC2Q14508 124 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
CCDC59-204ENST00000550589 KIR2DL5BQ8NHK3 375 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 CDC42SE2Q9NRR3 84 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 POLQO75417 2590 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 MYO9AB2RTY4 2548 aa3.11□□□□□ -1.91
CCDC59-204ENST00000550589 CELSR1Q9NYQ6 3014 aa3.1□□□□□ -1.91
CCDC59-204ENST00000550589 TRAV8-3A0A0A6YYJ7 113 aa3.1□□□□□ -1.91
CCDC59-204ENST00000550589 TRAV13-1A0A0B4J241 112 aa3.1□□□□□ -1.91
CCDC59-204ENST00000550589 IGHV3-33P01772 117 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms