RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 IGHV3-30-5P0DP03 117 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 LGALS3P17931 250 aaKnown RBP3.83□□□□□ -1.8
KRR1-203ENST00000550023 FOXI1Q12951 378 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 CD300EQ496F6 205 aaPredicted RBP3.83□□□□□ -1.8
KRR1-203ENST00000550023 MAPK1IP1LQ8NDC0 245 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 C16orf74Q96GX8 76 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 DUX3Q96PT4 197 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 SPANXDQ9BXN6 97 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 SPANXCQ9NY87 97 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 UBE2D4Q9Y2X8 147 aa3.83□□□□□ -1.8
KRR1-203ENST00000550023 CHD6Q8TD26 2715 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 DOPEY2Q9Y3R5 2298 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.82□□□□□ -1.8
KRR1-203ENST00000550023 IGHV1-58A0A0C4DH39 117 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 CCL24O00175 119 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 SPRY2O43597 315 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 TCTAP57738 103 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 HILS1P60008 231 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 RPL24P83731 157 aaKnown RBP3.82□□□□□ -1.8
KRR1-203ENST00000550023 DAZ2Q13117 558 aaKnown RBP3.82□□□□□ -1.8
KRR1-203ENST00000550023 COTL1Q14019 142 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 KHDC1LQ5JSQ8 128 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 ZFAND6Q6FIF0 208 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 DAZ4Q86SG3 579 aaKnown RBP3.82□□□□□ -1.8
KRR1-203ENST00000550023 STHQ8IWL8 128 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 C10orf126Q8N4M7 172 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 LINC01600Q96MT4 127 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 C1QTNF4Q9BXJ3 329 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 VCX2Q9H322 139 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
KRR1-203ENST00000550023 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
KRR1-203ENST00000550023 IGLV5-39A0A0G2JS06 123 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 H7C423 109 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 K7EQD1 137 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 TSPAN13O95857 204 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 IGKV3-20P01619 116 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 IGLV1-51P01701 117 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 LINC00694P0DN24 101 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 TIRAPP58753 221 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 COPS9Q8WXC6 57 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 VSIG2Q96IQ7 327 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 GTSF1LQ9H1H1 148 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 ESM1Q9NQ30 184 aa3.81□□□□□ -1.8
KRR1-203ENST00000550023 MRPL16Q9NX20 251 aaKnown RBP3.81□□□□□ -1.8
KRR1-203ENST00000550023 PDZD2O15018 2839 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 G3V4G9 280 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 H3BMG7 143 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 NDUFA1O15239 70 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 IGHV3-30-3P0DP02 117 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 IFITM1P13164 125 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 HERVK_113P63121 156 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 SRSF9Q13242 221 aaKnown RBP eCLIP3.8□□□□□ -1.8
KRR1-203ENST00000550023 MIAQ16674 131 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 SFTA2Q6UW10 78 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 Q6ZUT4 128 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 SBSPONQ8IVN8 264 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 ZNF418Q8TF45 676 aaPredicted RBP3.8□□□□□ -1.8
KRR1-203ENST00000550023 RAB37Q96AX2 223 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 LINC01587Q99440 93 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 LITAFQ99732 161 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 TEX15Q9BXT5 2789 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 TLN2Q9Y4G6 2542 aa3.8□□□□□ -1.8
KRR1-203ENST00000550023 CCDC168Q8NDH2 2452 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 SCGB1A1P11684 91 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 PLA2G2AP14555 144 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 PROK1P58294 105 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
KRR1-203ENST00000550023 C1orf158Q8N1D5 194 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 LINC00612Q8N6U2 182 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 LINC01006Q8NI28 216 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
KRR1-203ENST00000550023 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 OVOL2Q9BRP0 275 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 YAE1D1Q9NRH1 226 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 FAM30AQ9NZY2 134 aa3.79□□□□□ -1.8
KRR1-203ENST00000550023 HELZ2Q9BYK8 2649 aaKnown RBP3.78□□□□□ -1.8
KRR1-203ENST00000550023 OTOGQ6ZRI0 2925 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 NIPBLQ6KC79 2804 aaeCLIP3.78□□□□□ -1.8
KRR1-203ENST00000550023 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 TEX48A0A1B0GUV7 120 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 TRBV6-4A0A1B0GX49 114 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 PLAC8L1A1L4L8 177 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 J3QKU1 62 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 SAP30O75446 220 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
KRR1-203ENST00000550023 CFC1BP0CG36 223 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 CFC1P0CG37 223 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 AZU1P20160 251 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 INSL3P51460 131 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 EMP1P54849 157 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 CITED2Q99967 270 aaPredicted RBP3.78□□□□□ -1.8
KRR1-203ENST00000550023 NAA38Q9BRA0 125 aaKnown RBP3.78□□□□□ -1.8
KRR1-203ENST00000550023 PRO1854Q9UHT4 67 aa3.78□□□□□ -1.8
KRR1-203ENST00000550023 NDUFA12Q9UI09 145 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms