RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 TMEM78Q5T7P6 136 aa2.71□□□□□ -1.98
SYT1-208ENST00000549671 AKAP14Q86UN6 197 aa2.71□□□□□ -1.98
SYT1-208ENST00000549671 TMEM75Q8N9X5 138 aa2.71□□□□□ -1.98
SYT1-208ENST00000549671 PTH2Q96A98 100 aa2.71□□□□□ -1.98
SYT1-208ENST00000549671 CIB3Q96Q77 187 aaPredicted RBP2.71□□□□□ -1.98
SYT1-208ENST00000549671 LENEPQ9Y5L5 61 aa2.71□□□□□ -1.98
SYT1-208ENST00000549671 IGLV10-54A0A075B6I4 117 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 IGKV2-40A0A087WW87 121 aaPredicted RBP2.7□□□□□ -1.98
SYT1-208ENST00000549671 IGKV2D-40P01614 121 aaPredicted RBP2.7□□□□□ -1.98
SYT1-208ENST00000549671 CRPP02741 224 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 CD3DP04234 171 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 HIST1H1EP10412 219 aaKnown RBP2.7□□□□□ -1.98
SYT1-208ENST00000549671 IAPPP10997 89 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 SLC25A6P12236 298 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 NTF3P20783 257 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 COX6A2Q02221 97 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 LYZL2Q7Z4W2 148 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 FAM19A3Q7Z5A8 133 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 TMEM14CQ9P0S9 112 aa2.7□□□□□ -1.98
SYT1-208ENST00000549671 PIGBOS1A0A0B4J2F0 54 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 TINCRA0A1B0GVN0 87 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 DUXBA0A1W2PPF3 345 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 RBAKDNA6NC62 111 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 GNRH2O43555 120 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 SYNGR2O43760 224 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 CXorf1O96002 111 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 TYMSP04818 313 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 RAB14P61106 215 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 SLC38A11Q08AI6 406 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 FAM162BQ5T6X4 162 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 C10orf113Q5VZT2 155 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 STX12Q86Y82 276 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 YPEL4Q96NS1 127 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 NPVFQ9HCQ7 196 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 SLC39A9Q9NUM3 307 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 LINC00474Q9P2X8 69 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 RAB26Q9ULW5 256 aa2.69□□□□□ -1.98
SYT1-208ENST00000549671 C14orf166Q9Y224 244 aaKnown RBP2.69□□□□□ -1.98
SYT1-208ENST00000549671 A0A096LNI7 61 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 IGHV3-73A0A0B4J1V6 119 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 FAM24AA6NFZ4 105 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 C9JQL5 133 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 HPGDSO60760 199 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 IFNA7P01567 189 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 SCGB1C2P0DMR2 95 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 SPANXN5Q5MJ07 72 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 EXOC3-AS1Q8N2X6 119 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 SPANXA2-OT1Q8N9U9 137 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 FER1L6-AS1Q8NA97 138 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 SCGB1C1Q8TD33 95 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 RAB2BQ8WUD1 216 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 DIRC1Q969H9 104 aa2.68□□□□□ -1.98
SYT1-208ENST00000549671 SDHCQ99643 169 aaPredicted RBP2.68□□□□□ -1.98
SYT1-208ENST00000549671 TRBV6-8A0A0A6YYG3 113 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 TRAV1-1A0A0B4J248 108 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 C7orf66A4D0T2 115 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 A8MWV9 139 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 RGS5O15539 181 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 OR7C2O60412 319 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 ANGP03950 147 aaKnown RBP2.67□□□□□ -1.98
SYT1-208ENST00000549671 GZMBP10144 247 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 CRYGAP11844 174 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 S100A2P29034 98 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 PKIAP61925 76 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 SMAGPQ0VAQ4 97 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 SCGB2B2Q4G0G5 96 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 IZUMO2Q6UXV1 221 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 SNX29P2Q8IUI4 249 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 MIR7-3HGQ8N6C7 128 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 TMEM229BQ8NBD8 167 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 PFDN5Q99471 154 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 MGST2Q99735 147 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
SYT1-208ENST00000549671 TRAV21A0A0B4J279 112 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 SMIM31A0A1B0GVY4 71 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 UBE2D3P61077 147 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 UBE2D2P62837 147 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 MT1HP80294 61 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 SSBP1Q04837 148 aaKnown RBP2.66□□□□□ -1.98
SYT1-208ENST00000549671 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 ASB16-AS1Q495Z4 193 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 TMEM14EPQ6UXP3 125 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 C12orf45Q8N5I9 185 aaPredicted RBP2.66□□□□□ -1.98
SYT1-208ENST00000549671 STOML3Q8TAV4 291 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 ASB13Q8WXK3 278 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 GGACTQ9BVM4 153 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 TIMM9Q9Y5J7 89 aa2.66□□□□□ -1.98
SYT1-208ENST00000549671 GVQW2A0A096LPI5 108 aaPredicted RBP2.65□□□□□ -1.99
SYT1-208ENST00000549671 TRBV10-1A0A0K0K1A3 114 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 COLCA2A8K830 154 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 TMEM262E9PQX1 116 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 IGLV7-43P04211 117 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 PYYP10082 97 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 RNASE3P12724 160 aaKnown RBP2.65□□□□□ -1.99
SYT1-208ENST00000549671 MP68P56378 58 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 GABARAPL2P60520 117 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 RAB2AP61019 212 aa2.65□□□□□ -1.99
SYT1-208ENST00000549671 RRAS2P62070 204 aaPredicted RBP2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms