RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TMEM101Q96IK0 257 aa10.21□□□□□ -0.78
RAPGEF3-218ENST00000548919 A0A096LNT2 108 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 IGHV3-53P01767 116 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 Q6YL49 198 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 MAP6D1Q9H9H5 199 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 PTPN13Q12923 2485 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 IGHV3OR16-12A0A075B7B8 117 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 ZFYVE26Q68DK2 2539 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 NBPF19A0A087WUL8 3843 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 A8MTW9 85 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 COX6CP09669 75 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 XCL2Q9UBD3 114 aa10.2□□□□□ -0.78
RAPGEF3-218ENST00000548919 GAGE2BQ13066 116 aa10.19□□□□□ -0.78
RAPGEF3-218ENST00000548919 GAGE2EQ4V326 116 aa10.19□□□□□ -0.78
RAPGEF3-218ENST00000548919 DGAT2L7PQ6IED9 249 aa10.19□□□□□ -0.78
RAPGEF3-218ENST00000548919 GAGE2DQ9UEU5 116 aa10.19□□□□□ -0.78
RAPGEF3-218ENST00000548919 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
RAPGEF3-218ENST00000548919 LINC00694P0DN24 101 aa10.18□□□□□ -0.78
RAPGEF3-218ENST00000548919 DSCR9P59020 149 aa10.18□□□□□ -0.78
RAPGEF3-218ENST00000548919 SETD2Q9BYW2 2564 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF3-218ENST00000548919 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF3-218ENST00000548919 Q9H8V8 135 aa10.18□□□□□ -0.78
RAPGEF3-218ENST00000548919 LST1O00453 97 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 LINC01600Q96MT4 127 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 YAE1D1Q9NRH1 226 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 NDUFA1O15239 70 aa10.17□□□□□ -0.78
RAPGEF3-218ENST00000548919 JMJD1CQ15652 2540 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 NAV2Q8IVL1 2488 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 J3QLI3 93 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 RS1O15537 224 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 INSP01308 110 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 TTC32Q5I0X7 151 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 LINC00242Q5T6M2 205 aa10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
RAPGEF3-218ENST00000548919 TRAV13-1A0A0B4J241 112 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 NDUFV3P56181 108 aaKnown RBP10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 PIK3CD-AS1Q5SR53 167 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 SETXQ7Z333 2677 aaKnown RBP10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 PEMTQ9UBM1 199 aa10.15□□□□□ -0.78
RAPGEF3-218ENST00000548919 TRGV1A0A0A0MS02 117 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 TIMM17BO60830 172 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 TIRAPP58753 221 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 CR1P17927 2039 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 H3BT86 120 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 IFITM1P13164 125 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 B5MCH6 92 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 FSHBP01225 129 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 SOSTDC1Q6X4U4 206 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
RAPGEF3-218ENST00000548919 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
RAPGEF3-218ENST00000548919 IGHV4-31P0DP07 118 aa10.13□□□□□ -0.79
RAPGEF3-218ENST00000548919 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-218ENST00000548919 Q8N2B8 174 aa10.13□□□□□ -0.79
RAPGEF3-218ENST00000548919 C11orf44Q8N8P7 122 aa10.13□□□□□ -0.79
RAPGEF3-218ENST00000548919 IGLV5-39A0A0G2JS06 123 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 SMIM1B2RUZ4 78 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 ODF3L2Q3SX64 289 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 C4orf3Q8WVX3 66 aa10.12□□□□□ -0.79
RAPGEF3-218ENST00000548919 HERVK_113P63121 156 aa10.11□□□□□ -0.79
RAPGEF3-218ENST00000548919 GAGE5Q13069 117 aa10.11□□□□□ -0.79
RAPGEF3-218ENST00000548919 GAGE6Q13070 117 aa10.11□□□□□ -0.79
RAPGEF3-218ENST00000548919 Q6ZTI0 123 aa10.11□□□□□ -0.79
RAPGEF3-218ENST00000548919 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
RAPGEF3-218ENST00000548919 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
RAPGEF3-218ENST00000548919 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
RAPGEF3-218ENST00000548919 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
RAPGEF3-218ENST00000548919 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
RAPGEF3-218ENST00000548919 KRTAP10-9P60411 292 aa10.09□□□□□ -0.79
RAPGEF3-218ENST00000548919 GAGE4Q13068 117 aa10.09□□□□□ -0.79
RAPGEF3-218ENST00000548919 STHQ8IWL8 128 aa10.09□□□□□ -0.79
RAPGEF3-218ENST00000548919 RPL36AP83881 106 aaKnown RBP10.08□□□□□ -0.8
RAPGEF3-218ENST00000548919 RPL36ALQ969Q0 106 aaKnown RBP10.08□□□□□ -0.8
RAPGEF3-218ENST00000548919 K7EQD1 137 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 Q96MF0 132 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 F5H768 121 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 COX7A2LO14548 114 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 PRB1P04280 392 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 Q6Q795 121 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
RAPGEF3-218ENST00000548919 APCP25054 2843 aa10.06□□□□□ -0.8
RAPGEF3-218ENST00000548919 IL17DQ8TAD2 202 aa10.06□□□□□ -0.8
RAPGEF3-218ENST00000548919 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
RAPGEF3-218ENST00000548919 GAGE7O76087 117 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 GAGE12FP0CL80 117 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 GAGE12GP0CL81 117 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 GAGE12IP0CL82 117 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 CCDC168Q8NDH2 2452 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
RAPGEF3-218ENST00000548919 LOC100131303A0A0U1RQF7 123 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms