RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 HIST1H4AP62805 103 aaKnown RBP3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 RPS28P62857 69 aaKnown RBP3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 C5orf38Q86SI9 138 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 TMEM86BQ8N661 226 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 C11orf72Q8NBR9 251 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 LINC00526Q96FQ7 95 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 ZNF625Q96I27 306 aaPredicted RBP3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 JPT2Q9H910 190 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 VPREB3Q9UKI3 123 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 ZNF292O60281 2723 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 PCNX1Q96RV3 2341 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 ZZEF1O43149 2961 aa3.6□□□□□ -1.83
TGFBR1-205ENST00000548365 PRRC2AP48634 2157 aaKnown RBP3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 CNOT1A5YKK6 2376 aaKnown RBP3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 MAP1BP46821 2468 aaKnown RBP3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 IGHV3OR16-10A0A075B7F0 116 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 IGHV4-61A0A0C4DH41 118 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 IGHV3-11P01762 117 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 PRSS2P07478 247 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 CRYGAP11844 174 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 SPINK13Q1W4C9 94 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 DGAT2L7PQ6IED9 249 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 LRRC75A-AS1Q8N1F1 130 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 C3orf22Q8N5N4 141 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 OBSCN-AS1Q96MR7 158 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 CCL19Q99731 98 aa3.59□□□□□ -1.83
TGFBR1-205ENST00000548365 ZFHX4Q86UP3 3567 aa3.59□□□□□ -1.84
TGFBR1-205ENST00000548365 CEP250Q9BV73 2442 aa3.59□□□□□ -1.84
TGFBR1-205ENST00000548365 PTPRZ1P23471 2315 aaPredicted RBP3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 PTPRQQ9UMZ3 2332 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 TRBV10-3A0A0K0K1G6 114 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 IBA57-AS1B1ANH7 110 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 INAFM1C9JVW0 142 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 CRPP02741 224 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 IGHV4-38-2P0DP08 117 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 PRB4P10163 310 aaPredicted RBP3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 HOXD3P31249 432 aaPredicted RBP3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 BLCAPP62952 87 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 ADAMTSL4-AS1Q5T5F5 129 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 Q6JHZ5 121 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 CFAP161Q6P656 301 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 DUX3Q96PT4 197 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 CITED2Q99967 270 aaPredicted RBP3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 CDKN2A-AS1Q9UH64 79 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 NACAE9PAV3 2078 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 SPTBN2O15020 2390 aa3.58□□□□□ -1.84
TGFBR1-205ENST00000548365 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 TRAV8-3A0A0A6YYJ7 113 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 TRBV6-4A0A1B0GX49 114 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 F5H768 121 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 JMJD7-PLA2G4BH0Y9G9 81 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 K7EQD1 137 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 CRLF1O75462 422 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 DNAL4O96015 105 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 COX7CP15954 63 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 TMEM258P61165 79 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 BRD3OSQ6XYD6 125 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 PRR26Q8N8Z3 221 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 DUX5Q96PT3 197 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 Q9H8V8 135 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 SS18L2Q9UHA2 77 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 LINC00527Q9UJ94 153 aa3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 TLN1Q9Y490 2541 aaKnown RBP3.57□□□□□ -1.84
TGFBR1-205ENST00000548365 ABCA2Q9BZC7 2435 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 CELSR3Q9NYQ7 3312 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 FAM236AA0A1B0GUQ0 79 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 FAM236BA0A1B0GV22 79 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1BA6NDE4 496 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1EA6NEQ0 496 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 CCDC179H3BU77 68 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 H7C2G1 150 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 J3KT08 172 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 NDUFA7O95182 113 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 NDUFC2O95298 119 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 LY6G6DO95868 133 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 IGHV4-59P01825 116 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1DP0C7P1 496 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1A1P0DJD3 496 aaKnown RBP3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 RBMY1CP0DJD4 496 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 ATP5J2P56134 94 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 DEFB1P60022 68 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 LY6EQ16553 131 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 Q6ZSV7 163 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 C16orf74Q96GX8 76 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 LINC00167Q96N53 147 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 LINC01587Q99440 93 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 ZNF702PQ9H963 129 aa3.56□□□□□ -1.84
TGFBR1-205ENST00000548365 EP300Q09472 2414 aaPredicted RBP3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 A0A096LNT2 108 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 BAALC-AS2P0C853 105 aa3.55□□□□□ -1.84
TGFBR1-205ENST00000548365 SYNJ2BPP57105 145 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms