RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 hADV29S1A0JD25 119 aa7.82□□□□□ -1.16
NPAS3-205ENST00000547068 IGKV3-20P01619 116 aa7.82□□□□□ -1.16
NPAS3-205ENST00000547068 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
NPAS3-205ENST00000547068 C10orf105Q8TEF2 133 aa7.82□□□□□ -1.16
NPAS3-205ENST00000547068 CSMD2Q7Z408 3487 aa7.81□□□□□ -1.16
NPAS3-205ENST00000547068 TRACP01848 142 aa7.81□□□□□ -1.16
NPAS3-205ENST00000547068 C19orf54Q5BKX5 351 aa7.81□□□□□ -1.16
NPAS3-205ENST00000547068 NDUFA1O15239 70 aa7.81□□□□□ -1.16
NPAS3-205ENST00000547068 INAFM2P0DMQ5 153 aa7.81□□□□□ -1.16
NPAS3-205ENST00000547068 ANKRD17O75179 2603 aaKnown RBP7.8□□□□□ -1.16
NPAS3-205ENST00000547068 IGHV1OR15-1A0A075B7D0 117 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 A0A0U1RRA0 63 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 HIST1H4AP62805 103 aaKnown RBP7.8□□□□□ -1.16
NPAS3-205ENST00000547068 Q8N2B8 174 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 ABCA12Q86UK0 2595 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 BEAN1Q3B7T3 259 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 CDKN2A-AS1Q9UH64 79 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 MOB4Q9Y3A3 225 aa7.8□□□□□ -1.16
NPAS3-205ENST00000547068 NACAE9PAV3 2078 aa7.79□□□□□ -1.16
NPAS3-205ENST00000547068 IGHV4-30-2A0A087WSY4 118 aa7.79□□□□□ -1.16
NPAS3-205ENST00000547068 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
NPAS3-205ENST00000547068 UBE2D4Q9Y2X8 147 aa7.79□□□□□ -1.16
NPAS3-205ENST00000547068 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
NPAS3-205ENST00000547068 FBN2P35556 2912 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.78□□□□□ -1.16
NPAS3-205ENST00000547068 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 IGKV2-29A2NJV5 120 aaPredicted RBP7.78□□□□□ -1.16
NPAS3-205ENST00000547068 IGHG2P01859 326 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 EDN2P20800 178 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 USMG5Q96IX5 58 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 CYSTM1Q9H1C7 97 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 Q9H8V8 135 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 IGHV3OR16-10A0A075B7F0 116 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 PROK1P58294 105 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 SPINK13Q1W4C9 94 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 FAM222AQ5U5X8 452 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 NAV2Q8IVL1 2488 aa7.78□□□□□ -1.16
NPAS3-205ENST00000547068 APCP25054 2843 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 POLQO75417 2590 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 PF4V1P10720 104 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
NPAS3-205ENST00000547068 FAM218AQ96MZ4 157 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 CHCHD7Q9BUK0 85 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 IGHV4-61A0A0C4DH41 118 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 WIPF1O43516 503 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 LMO4P61968 165 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
NPAS3-205ENST00000547068 MALP21145 153 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 TMEM258P61165 79 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 KIR2DL5BQ8NHK3 375 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 Q96MF0 132 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 Q9HAA7 133 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 RS1O15537 224 aa7.76□□□□□ -1.17
NPAS3-205ENST00000547068 UNC79Q9P2D8 2635 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 DNAL4O96015 105 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 HTN1P15515 57 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.75□□□□□ -1.17
NPAS3-205ENST00000547068 LINC00467Q9BRT7 94 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 IGLV5-45A0A087WSX0 123 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 PRIMA1Q86XR5 153 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 Q9UF83 564 aa7.75□□□□□ -1.17
NPAS3-205ENST00000547068 SNRPD3P62318 126 aaKnown RBP7.74□□□□□ -1.17
NPAS3-205ENST00000547068 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 VPS13CQ709C8 3753 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 KNCNA6PVL3 124 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 B4DSR2 109 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 H3BUA1 57 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 COX6A2Q02221 97 aa7.74□□□□□ -1.17
NPAS3-205ENST00000547068 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 HOXD3P31249 432 aaPredicted RBP7.73□□□□□ -1.17
NPAS3-205ENST00000547068 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 K7EMT4 169 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 HIST2H2BDQ6DRA6 164 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 WFDC11Q8NEX6 87 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
NPAS3-205ENST00000547068 ITPR2Q14571 2701 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 KRTAP1-3Q8IUG1 177 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 LINC01356Q8N9X3 169 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 MAP1AP78559 2803 aaPredicted RBP7.72□□□□□ -1.17
NPAS3-205ENST00000547068 A0A087WVE0 104 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 MSMBP08118 114 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 ZNF415Q09FC8 603 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 LY6EQ16553 131 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 Q6ZSN1 163 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 MAPK1IP1LQ8NDC0 245 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 C14orf132Q9NPU4 83 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 ZFHX3Q15911 3703 aa7.72□□□□□ -1.17
NPAS3-205ENST00000547068 FLNBO75369 2602 aaKnown RBP7.71□□□□□ -1.17
NPAS3-205ENST00000547068 A0A096LNT2 108 aa7.71□□□□□ -1.18
NPAS3-205ENST00000547068 PIK3CD-AS1Q5SR53 167 aa7.71□□□□□ -1.18
NPAS3-205ENST00000547068 Q6JHZ5 121 aa7.71□□□□□ -1.18
NPAS3-205ENST00000547068 ASH1LQ9NR48 2969 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms