RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FBXL19-AS1Q494R0 122 aa9.59□□□□□ -0.87
PTCH1-212ENST00000546744 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
PTCH1-212ENST00000546744 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
PTCH1-212ENST00000546744 CHKB-CPT1BH3BT56 60 aa9.59□□□□□ -0.87
PTCH1-212ENST00000546744 IGF1P05019 195 aa9.59□□□□□ -0.87
PTCH1-212ENST00000546744 FAM19A5Q7Z5A7 132 aaPredicted RBP9.59□□□□□ -0.88
PTCH1-212ENST00000546744 SIRPDQ9H106 197 aa9.59□□□□□ -0.88
PTCH1-212ENST00000546744 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
PTCH1-212ENST00000546744 K7EQG2 157 aa9.58□□□□□ -0.88
PTCH1-212ENST00000546744 GNLYP22749 145 aa9.58□□□□□ -0.88
PTCH1-212ENST00000546744 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
PTCH1-212ENST00000546744 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
PTCH1-212ENST00000546744 CDIP1Q9H305 208 aa9.57□□□□□ -0.88
PTCH1-212ENST00000546744 MPLKIPQ8TAP9 179 aa9.57□□□□□ -0.88
PTCH1-212ENST00000546744 SPTBN4Q9H254 2564 aa9.57□□□□□ -0.88
PTCH1-212ENST00000546744 LAMA1P25391 3075 aa9.57□□□□□ -0.88
PTCH1-212ENST00000546744 MSMPQ1L6U9 139 aa9.57□□□□□ -0.88
PTCH1-212ENST00000546744 PLA2G5P39877 138 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 C1orf229Q6ZS94 237 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-212ENST00000546744 DEFB105AQ8NG35 78 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 LINC00467Q9BRT7 94 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
PTCH1-212ENST00000546744 BCE1O60756 84 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 LY6DQ14210 128 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 MRGPRG-AS1Q2M3A8 158 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 PRO0255Q9UI72 69 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 TSHBP01222 138 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 Q6ZS46 218 aa9.56□□□□□ -0.88
PTCH1-212ENST00000546744 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 LY6LH3BQJ8 138 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 NCR3O14931 201 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 UNQ9165/PRO28630Q6UXU0 137 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 VCANP13611 3396 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 A0A096LNJ9 63 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 CCL24O00175 119 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 SPART-AS1P0CW21 52 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 RPL28P46779 137 aaKnown RBP9.55□□□□□ -0.88
PTCH1-212ENST00000546744 PRORYQ9H606 182 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 SMAD5-AS1Q9Y6J3 95 aa9.55□□□□□ -0.88
PTCH1-212ENST00000546744 KLLNB2CW77 178 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 CCKP06307 115 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 HRCT1Q6UXD1 115 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 DAZAP2Q15038 168 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-212ENST00000546744 TLN1Q9Y490 2541 aaKnown RBP9.54□□□□□ -0.88
PTCH1-212ENST00000546744 MIFP14174 115 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 CEMP1Q6PRD7 247 aaPredicted RBP9.54□□□□□ -0.88
PTCH1-212ENST00000546744 DEFB112Q30KQ8 113 aa9.54□□□□□ -0.88
PTCH1-212ENST00000546744 TRBV10-3A0A0K0K1G6 114 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 NDUFS5O43920 106 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 RNASE3P12724 160 aaKnown RBP9.53□□□□□ -0.88
PTCH1-212ENST00000546744 Q6ZQT7 251 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 SEM1Q6ZVN7 128 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 SPTSSBQ8NFR3 76 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 WISP2O76076 250 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 PRR14LQ5THK1 2151 aa9.53□□□□□ -0.88
PTCH1-212ENST00000546744 IGHV4-59P01825 116 aa9.52□□□□□ -0.88
PTCH1-212ENST00000546744 A6NDX4 124 aa9.52□□□□□ -0.89
PTCH1-212ENST00000546744 COX17Q14061 63 aa9.52□□□□□ -0.89
PTCH1-212ENST00000546744 ANKRD11Q6UB99 2663 aaPredicted RBP9.52□□□□□ -0.89
PTCH1-212ENST00000546744 CRYGAP11844 174 aa9.52□□□□□ -0.89
PTCH1-212ENST00000546744 SONP18583 2426 aaKnown RBP9.52□□□□□ -0.89
PTCH1-212ENST00000546744 TRBV6-4A0A1B0GX49 114 aa9.52□□□□□ -0.89
PTCH1-212ENST00000546744 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 WNK1Q9H4A3 2382 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 KIAA1549Q9HCM3 1950 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 LINC01546A6NGU7 62 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-212ENST00000546744 APRG1Q8IVJ8 170 aa9.51□□□□□ -0.89
PTCH1-212ENST00000546744 VPS13AQ96RL7 3174 aa9.5□□□□□ -0.89
PTCH1-212ENST00000546744 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
PTCH1-212ENST00000546744 SLURP1P55000 103 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 C6orf99Q4VX62 202 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 PRRC2CQ9Y520 2896 aaKnown RBP9.49□□□□□ -0.89
PTCH1-212ENST00000546744 C4orf3Q8WVX3 66 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 C11orf21Q9P2W6 132 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
PTCH1-212ENST00000546744 IGLV2-18A0A075B6J9 118 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 CRYGDP07320 174 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 UBE2AP49459 152 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 MAP6D1Q9H9H5 199 aa9.48□□□□□ -0.89
PTCH1-212ENST00000546744 A0A096LPF7 62 aa9.47□□□□□ -0.89
PTCH1-212ENST00000546744 Q8N6K4 173 aa9.47□□□□□ -0.89
PTCH1-212ENST00000546744 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
PTCH1-212ENST00000546744 C9orf66Q5T8R8 295 aa9.47□□□□□ -0.89
PTCH1-212ENST00000546744 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.89
PTCH1-212ENST00000546744 PRO0461Q9UI25 63 aa9.46□□□□□ -0.89
PTCH1-212ENST00000546744 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
PTCH1-212ENST00000546744 TRBV6-8A0A0A6YYG3 113 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms