RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ZFP2Q6ZN57 461 aa6.02□□□□□ -1.45
VPS29-203ENST00000546588 ORMDL3Q8N138 153 aa6.02□□□□□ -1.45
VPS29-203ENST00000546588 PLEKHB2Q96CS7 222 aa6.02□□□□□ -1.45
VPS29-203ENST00000546588 TRBV6-5A0A0K0K1A5 114 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 K7EP34 96 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 TAX1BP3O14907 124 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 NRACQ8N912 160 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 LINC01587Q99440 93 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 KIR2DL4Q99706 377 aa6.01□□□□□ -1.45
VPS29-203ENST00000546588 COL6A5A8TX70 2615 aa6□□□□□ -1.45
VPS29-203ENST00000546588 D6R8Y8 96 aa6□□□□□ -1.45
VPS29-203ENST00000546588 K7EMI3 77 aa6□□□□□ -1.45
VPS29-203ENST00000546588 PPP1R17O96001 155 aa6□□□□□ -1.45
VPS29-203ENST00000546588 MIFP14174 115 aa6□□□□□ -1.45
VPS29-203ENST00000546588 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
VPS29-203ENST00000546588 ZNF876PQ49A33 203 aa6□□□□□ -1.45
VPS29-203ENST00000546588 C10orf25Q5T742 122 aa6□□□□□ -1.45
VPS29-203ENST00000546588 Q6Q795 121 aa6□□□□□ -1.45
VPS29-203ENST00000546588 CHCHD1Q96BP2 118 aaKnown RBP6□□□□□ -1.45
VPS29-203ENST00000546588 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
VPS29-203ENST00000546588 IGLV2-18A0A075B6J9 118 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 LINC00694P0DN24 101 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 HINT1P49773 126 aaPredicted RBP5.99□□□□□ -1.45
VPS29-203ENST00000546588 RRN3P1Q2M238 152 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 KIAA1644Q3SXP7 199 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 CFAP126Q5VTH2 177 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 MRPL55Q7Z7F7 128 aaKnown RBP5.99□□□□□ -1.45
VPS29-203ENST00000546588 Q8NAQ8 132 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 PRELID3AQ96N28 172 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
VPS29-203ENST00000546588 TRAV4A0A0B4J268 109 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 MUC21A0A0G2JKD1 596 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 MUC21A0A140T8X8 626 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 CCDC179H3BU77 68 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 OXTP01178 125 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 NPYP01303 97 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 IGLC3P0DOY3 106 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
VPS29-203ENST00000546588 TTC32Q5I0X7 151 aa5.98□□□□□ -1.45
VPS29-203ENST00000546588 TIMM8BQ9Y5J9 83 aaPredicted RBP5.98□□□□□ -1.45
VPS29-203ENST00000546588 IGLV5-39A0A0G2JS06 123 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 TEX48A0A1B0GUV7 120 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 LYRM9A8MSI8 78 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 M0QY20 66 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 SERF1AO75920 110 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 DPM2O94777 84 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 IGHV3-53P01767 116 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 PRM2P04554 102 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 IFITM1P13164 125 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 CKS2P33552 79 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
VPS29-203ENST00000546588 C14orf178Q8N769 122 aaPredicted RBP5.97□□□□□ -1.45
VPS29-203ENST00000546588 NAA38Q9BRA0 125 aaKnown RBP5.97□□□□□ -1.45
VPS29-203ENST00000546588 C11orf68Q9H3H3 251 aaKnown RBP5.97□□□□□ -1.45
VPS29-203ENST00000546588 JPT2Q9H910 190 aa5.97□□□□□ -1.45
VPS29-203ENST00000546588 IGHV4-28A0A0C4DH34 117 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 TRBV10-1A0A0K0K1A3 114 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 TRBV27A0A0K0K1C4 114 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 H7C1H1 209 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 NUPR1O60356 82 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 POLR2KP53803 58 aaKnown RBP5.96□□□□□ -1.46
VPS29-203ENST00000546588 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 Q8N8P6 123 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 SMIM2Q9BVW6 85 aa5.96□□□□□ -1.46
VPS29-203ENST00000546588 NXT2Q9NPJ8 142 aaKnown RBP5.96□□□□□ -1.46
VPS29-203ENST00000546588 A0A096LNJ9 63 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 SEC11AP67812 179 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 DEFB135Q30KP9 77 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 SPATA45Q537H7 98 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 LYRM7Q5U5X0 104 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 Q6ZTI0 123 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 Q6ZUT4 128 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 TM2D3Q9BRN9 247 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 Q9UF83 564 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 NOTCH3Q9UM47 2321 aa5.95□□□□□ -1.46
VPS29-203ENST00000546588 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 A0A0U1RQV1 116 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 TRBV6-4A0A1B0GX49 114 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 LINC01549A6NIU2 74 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 TMEM262E9PQX1 116 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 K7EIL1 84 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 NCR2O95944 276 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 HTN1P15515 57 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 IFI27P40305 119 aaPredicted RBP5.94□□□□□ -1.46
VPS29-203ENST00000546588 BAGE3Q86Y29 109 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 ATP6V0E2Q8NHE4 81 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 ST20Q9HBF5 79 aa5.94□□□□□ -1.46
VPS29-203ENST00000546588 NOP10Q9NPE3 64 aaKnown RBP5.94□□□□□ -1.46
VPS29-203ENST00000546588 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 IGHV1-24A0A0C4DH33 117 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 F8W1H4 67 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 SMKR1H3BMG3 65 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 GAGE2BQ13066 116 aa5.93□□□□□ -1.46
VPS29-203ENST00000546588 GAGE2EQ4V326 116 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms