RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 DPH3Q96FX2 82 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 FLNCQ14315 2725 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 SVEP1Q4LDE5 3571 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 EDN2P20800 178 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 MALP21145 153 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 PROK1P58294 105 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
CLPTM1-203ENST00000546079 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 IGKV2-29A2NJV5 120 aaPredicted RBP11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 PF4V1P10720 104 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 IGHV3-73A0A0B4J1V6 119 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 SERP2Q8N6R1 65 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 RNF152Q8N8N0 203 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 CCL19Q99731 98 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 LINC00467Q9BRT7 94 aa11.98□□□□□ -0.49
CLPTM1-203ENST00000546079 USP24Q9UPU5 2620 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 SNRPD3P62318 126 aaKnown RBP11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 IGHV4-61A0A0C4DH41 118 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 HIST2H2BDQ6DRA6 164 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
CLPTM1-203ENST00000546079 C10orf105Q8TEF2 133 aa11.96□□□□□ -0.49
CLPTM1-203ENST00000546079 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.49
CLPTM1-203ENST00000546079 UPK3BQ9BT76 320 aa11.96□□□□□ -0.49
CLPTM1-203ENST00000546079 A0A0U1RRA0 63 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 Q6JHZ5 121 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 PIMREGQ9BSJ6 248 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 PF4P02776 101 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 COX6A2Q02221 97 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 Q9UF83 564 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 SPG11Q96JI7 2443 aa11.95□□□□□ -0.5
CLPTM1-203ENST00000546079 TRAV13-1A0A0B4J241 112 aa11.94□□□□□ -0.5
CLPTM1-203ENST00000546079 DNAL4O96015 105 aa11.94□□□□□ -0.5
CLPTM1-203ENST00000546079 RPL28P46779 137 aaKnown RBP11.94□□□□□ -0.5
CLPTM1-203ENST00000546079 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
CLPTM1-203ENST00000546079 K7EQG2 157 aa11.93□□□□□ -0.5
CLPTM1-203ENST00000546079 KIR2DL5BQ8NHK3 375 aa11.93□□□□□ -0.5
CLPTM1-203ENST00000546079 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
CLPTM1-203ENST00000546079 Q9HAA7 133 aa11.93□□□□□ -0.5
CLPTM1-203ENST00000546079 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
CLPTM1-203ENST00000546079 LINC00242Q5T6M2 205 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 IGHV3OR16-12A0A075B7B8 117 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 IGHV4-30-2A0A087WSY4 118 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 TRAV13-2A0A0B4J235 113 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 Q6ZSN1 163 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 ZFYVE26Q68DK2 2539 aa11.92□□□□□ -0.5
CLPTM1-203ENST00000546079 SMIM1B2RUZ4 78 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 PRB1P04280 392 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 DGAT2L7PQ6IED9 249 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 OBSCN-AS1Q96MR7 158 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
CLPTM1-203ENST00000546079 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
CLPTM1-203ENST00000546079 BBC3Q96PG8 261 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-203ENST00000546079 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 KNCNA6PVL3 124 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 RBMY1A1P0DJD3 496 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 RBMY1CP0DJD4 496 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 BRD3OSQ6XYD6 125 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 LINC00846Q9NV44 126 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 NACAE9PAV3 2078 aa11.89□□□□□ -0.51
CLPTM1-203ENST00000546079 USP17L23D6RBM5 183 aa11.88□□□□□ -0.51
CLPTM1-203ENST00000546079 OXTP01178 125 aa11.88□□□□□ -0.51
CLPTM1-203ENST00000546079 C14orf132Q9NPU4 83 aa11.88□□□□□ -0.51
CLPTM1-203ENST00000546079 IGHV3-38A0A0C4DH36 116 aa11.88□□□□□ -0.51
CLPTM1-203ENST00000546079 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
CLPTM1-203ENST00000546079 HTN1P15515 57 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 BLCAPP62952 87 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 DSCR8Q96T75 97 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 IGHV4-38-2P0DP08 117 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 CFHR3Q02985 330 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 LY6EQ16553 131 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 C9orf129Q5T035 196 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 CELSR1Q9NYQ6 3014 aa11.87□□□□□ -0.51
CLPTM1-203ENST00000546079 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
CLPTM1-203ENST00000546079 CRPP02741 224 aa11.86□□□□□ -0.51
CLPTM1-203ENST00000546079 UTP20O75691 2785 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-203ENST00000546079 A0A087WVE0 104 aa11.86□□□□□ -0.51
CLPTM1-203ENST00000546079 RS1O15537 224 aa11.86□□□□□ -0.51
CLPTM1-203ENST00000546079 ZFHX3Q15911 3703 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 A6NDX4 124 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 MSMBP08118 114 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 H0YGX0 51 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 SYNJ2BPP57105 145 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 Q5XG85 94 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 CRYBG3Q68DQ2 2970 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
CLPTM1-203ENST00000546079 A0A087WYN8 130 aa11.84□□□□□ -0.51
CLPTM1-203ENST00000546079 F5H768 121 aa11.84□□□□□ -0.51
CLPTM1-203ENST00000546079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.84□□□□□ -0.516e-8■■■■□ 21.3
CLPTM1-203ENST00000546079 C4orf26Q17RF5 130 aa11.83□□□□□ -0.51
CLPTM1-203ENST00000546079 CELSR2Q9HCU4 2923 aa11.83□□□□□ -0.52
CLPTM1-203ENST00000546079 IGKV2-28A0A075B6P5 120 aa11.82□□□□□ -0.52
CLPTM1-203ENST00000546079 H3BUX3 64 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms