RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 ATRAIDQ6UW56 229 aa4.07□□□□□ -1.76
LDHC-209ENST00000545848 C15orf54Q8N8G6 183 aa4.07□□□□□ -1.76
LDHC-209ENST00000545848 FAM104AQ969W3 186 aa4.07□□□□□ -1.76
LDHC-209ENST00000545848 UBE2WQ96B02 151 aa4.07□□□□□ -1.76
LDHC-209ENST00000545848 AP1S3Q96PC3 154 aa4.07□□□□□ -1.76
LDHC-209ENST00000545848 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
LDHC-209ENST00000545848 TNXBP22105 4242 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 IGLV10-54A0A075B6I4 117 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 TRAV8-6A0A0B4J262 113 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 TRBV10-1A0A0K0K1A3 114 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 TMEM238C9JI98 176 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 ADCYAP1P18509 176 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 HNRNPA3P51991 378 aaKnown RBP4.06□□□□□ -1.76
LDHC-209ENST00000545848 TEX261Q6UWH6 196 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 Q6ZSA8 131 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 ISOC2Q96AB3 205 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 SMIM7Q9BQ49 75 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 CHCHD7Q9BUK0 85 aa4.06□□□□□ -1.76
LDHC-209ENST00000545848 IGKV2D-24A0A075B6R9 120 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.05□□□□□ -1.76
LDHC-209ENST00000545848 IGKV2-29A2NJV5 120 aaPredicted RBP4.05□□□□□ -1.76
LDHC-209ENST00000545848 TMEM250H0YL14 139 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 TSHBP01222 138 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 IFNA1P01562 189 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 PRSS1P07477 247 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 RPL36AP83881 106 aaKnown RBP4.05□□□□□ -1.76
LDHC-209ENST00000545848 LAGE3Q14657 143 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 Q5VSD8 79 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 FAM231DQ6ZW35 169 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 AMN1Q8IY45 258 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 PACRGQ96M98 296 aaPredicted RBP4.05□□□□□ -1.76
LDHC-209ENST00000545848 PRR34Q9NV39 138 aa4.05□□□□□ -1.76
LDHC-209ENST00000545848 IGLV5-52A0A0A0MRZ9 124 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 HIGD1CA8MV81 97 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 IQCJQ1A5X6 159 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 COX19Q49B96 90 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 EIF5AL1Q6IS14 154 aaKnown RBP4.04□□□□□ -1.76
LDHC-209ENST00000545848 RASL11AQ6T310 242 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 LINC00269Q8N2A0 174 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 C15orf56Q8N910 161 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 CHCHD5Q9BSY4 110 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 EIF5A2Q9GZV4 153 aaKnown RBP4.04□□□□□ -1.76
LDHC-209ENST00000545848 DPH3P1Q9H4G8 78 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 TMEM242Q9NWH2 141 aa4.04□□□□□ -1.76
LDHC-209ENST00000545848 ZNF727A8MUV8 499 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 PRYO14603 147 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 HLA-DQA1P01909 254 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 ANGP03950 147 aaKnown RBP4.03□□□□□ -1.76
LDHC-209ENST00000545848 CHTF8P0CG12 524 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 RPS20P60866 119 aaKnown RBP4.03□□□□□ -1.76
LDHC-209ENST00000545848 CACNG7P62955 275 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 RNASE13Q5GAN3 156 aaKnown RBP4.03□□□□□ -1.76
LDHC-209ENST00000545848 LINC00518Q8N0U6 118 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 C10orf126Q8N4M7 172 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 LINC00526Q96FQ7 95 aa4.03□□□□□ -1.76
LDHC-209ENST00000545848 A0A1B0GXF2 115 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 PSCAO43653 123 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 HERV-K104P63124 156 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 ADIRFQ15847 76 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 MRPL51Q4U2R6 128 aaKnown RBP4.02□□□□□ -1.77
LDHC-209ENST00000545848 NFE4Q86UQ8 179 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 BOD1L2Q8IYS8 172 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 TSKUQ8WUA8 353 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 MAP1LC3CQ9BXW4 147 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 NIT2Q9NQR4 276 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 OSTCQ9NRP0 149 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
LDHC-209ENST00000545848 TRAV9-2A0A087WT02 112 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 A0A087WWC5 75 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 IGHV1-24A0A0C4DH33 117 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 IGKV3OR2-268A0A0C4DH90 116 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 SMIM27A0A1W2PRY6 76 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 SDHAF1A6NFY7 115 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 TMEM262E9PQX1 116 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 ESDP10768 282 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 POLR2KP53803 58 aaKnown RBP4.01□□□□□ -1.77
LDHC-209ENST00000545848 SNRPEP62304 92 aaKnown RBP4.01□□□□□ -1.77
LDHC-209ENST00000545848 REG3AQ06141 175 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 MRPL54Q6P161 138 aaKnown RBP4.01□□□□□ -1.77
LDHC-209ENST00000545848 OPRPNQ99935 248 aaPredicted RBP4.01□□□□□ -1.77
LDHC-209ENST00000545848 TMEM70Q9BUB7 260 aa4.01□□□□□ -1.77
LDHC-209ENST00000545848 TRBV25-1A0A075B6N4 114 aa4□□□□□ -1.77
LDHC-209ENST00000545848 A0A087WX48 190 aa4□□□□□ -1.77
LDHC-209ENST00000545848 TRAV8-3A0A0A6YYJ7 113 aa4□□□□□ -1.77
LDHC-209ENST00000545848 F2Z2F3 143 aa4□□□□□ -1.77
LDHC-209ENST00000545848 NPYP01303 97 aa4□□□□□ -1.77
LDHC-209ENST00000545848 TRGC1P0CF51 173 aa4□□□□□ -1.77
LDHC-209ENST00000545848 SMIM17P0DL12 118 aa4□□□□□ -1.77
LDHC-209ENST00000545848 PMCHP20382 165 aa4□□□□□ -1.77
LDHC-209ENST00000545848 ZC2HC1BQ5TFG8 222 aa4□□□□□ -1.77
LDHC-209ENST00000545848 Q6ZUT4 128 aa4□□□□□ -1.77
LDHC-209ENST00000545848 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
LDHC-209ENST00000545848 TMEM243Q9BU79 118 aa4□□□□□ -1.77
LDHC-209ENST00000545848 TMEM191AQ9H0A3 160 aa4□□□□□ -1.77
LDHC-209ENST00000545848 TRBV6-5A0A0K0K1A5 114 aa3.99□□□□□ -1.77
LDHC-209ENST00000545848 A0A1B0GUT8 65 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms