RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 INSP01308 110 aa11.39□□□□□ -0.59
LDLR-204ENST00000545707 LINC01620Q4KN68 170 aa11.39□□□□□ -0.59
LDLR-204ENST00000545707 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
LDLR-204ENST00000545707 Q96MF0 132 aa11.38□□□□□ -0.59
LDLR-204ENST00000545707 BBC3Q96PG8 261 aaPredicted RBP11.38□□□□□ -0.59
LDLR-204ENST00000545707 SETXQ7Z333 2677 aaKnown RBP11.38□□□□□ -0.59
LDLR-204ENST00000545707 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
LDLR-204ENST00000545707 MIAQ16674 131 aa11.38□□□□□ -0.59
LDLR-204ENST00000545707 ODF3L2Q3SX64 289 aa11.38□□□□□ -0.59
LDLR-204ENST00000545707 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
LDLR-204ENST00000545707 ITPR3Q14573 2671 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 RS1O15537 224 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 ATXN8Q156A1 80 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 Q8N2B8 174 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 TEX49A0A1B0GTD5 131 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 TMEM101Q96IK0 257 aa11.37□□□□□ -0.59
LDLR-204ENST00000545707 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 A0A1B0GV72 72 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 CLEC2BQ92478 149 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 SPANXDQ9BXN6 97 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 SPANXCQ9NY87 97 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 ZFAND6Q6FIF0 208 aa11.36□□□□□ -0.59
LDLR-204ENST00000545707 PIK3CD-AS1Q5SR53 167 aa11.35□□□□□ -0.59
LDLR-204ENST00000545707 CIDEAO60543 219 aa11.35□□□□□ -0.59
LDLR-204ENST00000545707 STHQ8IWL8 128 aa11.35□□□□□ -0.59
LDLR-204ENST00000545707 DEFB113Q30KQ7 82 aa11.34□□□□□ -0.59
LDLR-204ENST00000545707 Q6ZTI0 123 aa11.34□□□□□ -0.59
LDLR-204ENST00000545707 DNAJC30Q96LL9 226 aa11.34□□□□□ -0.59
LDLR-204ENST00000545707 TRAV13-1A0A0B4J241 112 aa11.33□□□□□ -0.6
LDLR-204ENST00000545707 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
LDLR-204ENST00000545707 Q9H8V8 135 aa11.33□□□□□ -0.6
LDLR-204ENST00000545707 FLNAP21333 2647 aaKnown RBP11.32□□□□□ -0.6
LDLR-204ENST00000545707 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
LDLR-204ENST00000545707 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
LDLR-204ENST00000545707 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
LDLR-204ENST00000545707 H7C423 109 aa11.31□□□□□ -0.6
LDLR-204ENST00000545707 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 TIRAPP58753 221 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 GAGE4Q13068 117 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 GAGE5Q13069 117 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 NDUFA1O15239 70 aa11.3□□□□□ -0.6
LDLR-204ENST00000545707 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 CITED2Q99967 270 aaPredicted RBP11.29□□□□□ -0.6
LDLR-204ENST00000545707 WFDC10AQ9H1F0 79 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 MTORP42345 2549 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 TMEM262E9PQX1 116 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 M0QXV9 152 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 CRLF1O75462 422 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
LDLR-204ENST00000545707 ACANP16112 2415 aa11.29□□□□□ -0.6
LDLR-204ENST00000545707 COX6CP09669 75 aa11.28□□□□□ -0.6
LDLR-204ENST00000545707 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
LDLR-204ENST00000545707 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
LDLR-204ENST00000545707 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
LDLR-204ENST00000545707 K7EQD1 137 aa11.27□□□□□ -0.6
LDLR-204ENST00000545707 CCL24O00175 119 aa11.27□□□□□ -0.6
LDLR-204ENST00000545707 RPL36AP83881 106 aaKnown RBP11.27□□□□□ -0.6
LDLR-204ENST00000545707 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.6
LDLR-204ENST00000545707 RPL36ALQ969Q0 106 aaKnown RBP11.27□□□□□ -0.6
LDLR-204ENST00000545707 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 IGLV5-39A0A0G2JS06 123 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 DNAJC9-AS1A6NH13 148 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 SMIM1B2RUZ4 78 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 HERVK_113P63121 156 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 SOSTDC1Q6X4U4 206 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 IL17DQ8TAD2 202 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 ESM1Q9NQ30 184 aa11.27□□□□□ -0.61
LDLR-204ENST00000545707 TRAV4A0A0B4J268 109 aa11.26□□□□□ -0.61
LDLR-204ENST00000545707 LOC100131303A0A0U1RQF7 123 aa11.26□□□□□ -0.61
LDLR-204ENST00000545707 UBE2WQ96B02 151 aa11.26□□□□□ -0.61
LDLR-204ENST00000545707 TIMM17BO60830 172 aa11.26□□□□□ -0.61
LDLR-204ENST00000545707 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
LDLR-204ENST00000545707 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
LDLR-204ENST00000545707 LST1O00453 97 aa11.25□□□□□ -0.61
LDLR-204ENST00000545707 IFITM1P13164 125 aa11.25□□□□□ -0.61
LDLR-204ENST00000545707 ZNF843Q8N446 348 aa11.25□□□□□ -0.61
LDLR-204ENST00000545707 RNF183Q96D59 192 aa11.25□□□□□ -0.61
LDLR-204ENST00000545707 TRAV8-4A0A0B4J246 113 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
LDLR-204ENST00000545707 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 GAGE7O76087 117 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
LDLR-204ENST00000545707 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 MEIG1Q5JSS6 88 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 CITED1Q99966 193 aa11.24□□□□□ -0.61
LDLR-204ENST00000545707 IGKV3OR2-268A0A0C4DH90 116 aa11.23□□□□□ -0.61
LDLR-204ENST00000545707 HIST2H2BCQ6DN03 193 aa11.23□□□□□ -0.61
LDLR-204ENST00000545707 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
LDLR-204ENST00000545707 TRAV25A0A0B4J276 109 aa11.21□□□□□ -0.61
LDLR-204ENST00000545707 F5H768 121 aa11.21□□□□□ -0.61
LDLR-204ENST00000545707 SNCGO76070 127 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms