RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 COL7A1Q02388 2944 aa9.5□□□□□ -0.89
SCARB1-209ENST00000545305 LINC01545Q5VT33 79 aa9.5□□□□□ -0.89
SCARB1-209ENST00000545305 Q6ZUT4 128 aa9.5□□□□□ -0.89
SCARB1-209ENST00000545305 OPRPNQ99935 248 aaPredicted RBP9.5□□□□□ -0.89
SCARB1-209ENST00000545305 C2orf88Q9BSF0 95 aa9.5□□□□□ -0.89
SCARB1-209ENST00000545305 A0A087WX48 190 aa9.49□□□□□ -0.89
SCARB1-209ENST00000545305 PRSS29PA6NIE9 313 aa9.49□□□□□ -0.89
SCARB1-209ENST00000545305 Q8N976 141 aa9.49□□□□□ -0.89
SCARB1-209ENST00000545305 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
SCARB1-209ENST00000545305 ODF1Q14990 250 aa9.48□□□□□ -0.89
SCARB1-209ENST00000545305 PMCHL2Q9BQD1 86 aa9.48□□□□□ -0.89
SCARB1-209ENST00000545305 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
SCARB1-209ENST00000545305 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 F8VRH5 84 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 DPM2O94777 84 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 CCL18P55774 89 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 ESRGQ1W209 222 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
SCARB1-209ENST00000545305 ZNF664Q8N3J9 261 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 AMELXQ99217 191 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
SCARB1-209ENST00000545305 PLNP26678 52 aa9.46□□□□□ -0.9
SCARB1-209ENST00000545305 RBX1P62877 108 aa9.46□□□□□ -0.9
SCARB1-209ENST00000545305 MPV17L2Q567V2 206 aa9.46□□□□□ -0.9
SCARB1-209ENST00000545305 ZC2HC1BQ5TFG8 222 aa9.46□□□□□ -0.9
SCARB1-209ENST00000545305 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.9
SCARB1-209ENST00000545305 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 IGKCP01834 107 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 TCTAP57738 103 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 S100A12P80511 92 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 C12orf57Q99622 126 aa9.45□□□□□ -0.9
SCARB1-209ENST00000545305 MRPS16Q9Y3D3 137 aaKnown RBP9.45□□□□□ -0.9
SCARB1-209ENST00000545305 HSBP1L1C9JCN9 74 aa9.44□□□□□ -0.9
SCARB1-209ENST00000545305 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
SCARB1-209ENST00000545305 ANGP03950 147 aaKnown RBP9.43□□□□□ -0.9
SCARB1-209ENST00000545305 LINC00518Q8N0U6 118 aa9.43□□□□□ -0.9
SCARB1-209ENST00000545305 VAMP8Q9BV40 100 aa9.43□□□□□ -0.9
SCARB1-209ENST00000545305 APLNQ9ULZ1 77 aa9.43□□□□□ -0.9
SCARB1-209ENST00000545305 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 IGLC3P0DOY3 106 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 UBE2D1P51668 147 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 SEC11AP67812 179 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 UBE2DNLQ8IWF7 75 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
SCARB1-209ENST00000545305 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 TRAV9-2A0A087WT02 112 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 IGHV3-30P01768 117 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 IGHV3-33P01772 117 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 IGHV3-30-3P0DP02 117 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 IGHV3-30-5P0DP03 117 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 ZFAND6Q6FIF0 208 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 MUC7Q8TAX7 377 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
SCARB1-209ENST00000545305 GEMIN7Q9H840 131 aaKnown RBP9.41□□□□□ -0.9
SCARB1-209ENST00000545305 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 C11orf86A6NJI1 115 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 Q8N3U1 123 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 UPK3BQ9BT76 320 aa9.4□□□□□ -0.9
SCARB1-209ENST00000545305 SIVA1O15304 175 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 CRPP02741 224 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 HERVK_113P63121 156 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 SS18Q15532 418 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 CLPSL2Q6UWE3 100 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 PAM16Q9Y3D7 125 aa9.39□□□□□ -0.91
SCARB1-209ENST00000545305 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 CCL25O15444 150 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 DNAH10OSP0CZ25 163 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 HERVK_113P61574 105 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 REG3AQ06141 175 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 FAM19A3Q7Z5A8 133 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
SCARB1-209ENST00000545305 SPATA45Q537H7 98 aa9.37□□□□□ -0.91
SCARB1-209ENST00000545305 LINC00242Q5T6M2 205 aa9.37□□□□□ -0.91
SCARB1-209ENST00000545305 H3BRM9 83 aa9.36□□□□□ -0.91
SCARB1-209ENST00000545305 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
SCARB1-209ENST00000545305 MAJINQ3KP22 176 aa9.36□□□□□ -0.91
SCARB1-209ENST00000545305 DYNC2H1Q8NCM8 4307 aaKnown RBP9.36□□□□□ -0.91
SCARB1-209ENST00000545305 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
SCARB1-209ENST00000545305 STPG4Q8N801 248 aa9.35□□□□□ -0.91
SCARB1-209ENST00000545305 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
SCARB1-209ENST00000545305 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
SCARB1-209ENST00000545305 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
SCARB1-209ENST00000545305 IGLV5-45A0A087WSX0 123 aa9.34□□□□□ -0.91
SCARB1-209ENST00000545305 TRAV8-4A0A0B4J246 113 aa9.33□□□□□ -0.92
SCARB1-209ENST00000545305 XCL1P47992 114 aa9.33□□□□□ -0.92
SCARB1-209ENST00000545305 COX6A2Q02221 97 aa9.33□□□□□ -0.92
SCARB1-209ENST00000545305 MIAQ16674 131 aa9.33□□□□□ -0.92
SCARB1-209ENST00000545305 ANKRD39Q53RE8 183 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms