RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 TRAPPC1Q9Y5R8 145 aa6.42□□□□□ -1.38
CIT-216ENST00000544872 LOC389332A0A1B0GUA5 103 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 LINC01549A6NIU2 74 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 FGF6P10767 208 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
CIT-216ENST00000544872 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 MPV17L2Q567V2 206 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 LINC00269Q8N2A0 174 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 NRACQ8N912 160 aa6.41□□□□□ -1.38
CIT-216ENST00000544872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
CIT-216ENST00000544872 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
CIT-216ENST00000544872 TSHBP01222 138 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 REG3AQ06141 175 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 C14orf177Q52M58 125 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 Q8N976 141 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 DEFB104AQ8WTQ1 72 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 MRPL18Q9H0U6 180 aaKnown RBP6.4□□□□□ -1.38
CIT-216ENST00000544872 PGPEP1Q9NXJ5 209 aa6.4□□□□□ -1.38
CIT-216ENST00000544872 NPYP01303 97 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 IFI27P40305 119 aaPredicted RBP6.39□□□□□ -1.39
CIT-216ENST00000544872 RAB5BP61020 215 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 SS18Q15532 418 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 FA2HQ7L5A8 372 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 Q8N8P6 123 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 KRTAP1-5Q9BYS1 174 aa6.39□□□□□ -1.39
CIT-216ENST00000544872 TGIF2-C20orf24A0A0A6YYL0 155 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 PRSS47A8MTI9 375 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 CCL25O15444 150 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 GAS8-AS1O95177 125 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 ESDP10768 282 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 Q6ZN92 141 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 MRPL52Q86TS9 123 aaKnown RBP6.38□□□□□ -1.39
CIT-216ENST00000544872 SPANXA1Q9NS26 97 aa6.38□□□□□ -1.39
CIT-216ENST00000544872 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
CIT-216ENST00000544872 TNP2Q05952 138 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 KIAA1644Q3SXP7 199 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 CYSLTR1Q9Y271 337 aa6.37□□□□□ -1.39
CIT-216ENST00000544872 C1orf196B1AJZ1 125 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 CDPF1Q6NVV7 123 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 ENHOQ6UWT2 76 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 C2orf88Q9BSF0 95 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 NACAE9PAV3 2078 aa6.36□□□□□ -1.39
CIT-216ENST00000544872 IGLV4-60A0A075B6I1 120 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 A0A087WTM6 91 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 Q8N3U1 123 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
CIT-216ENST00000544872 ALKBH7Q9BT30 221 aaPredicted RBP6.35□□□□□ -1.39
CIT-216ENST00000544872 VCX2Q9H322 139 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 AP5S1Q9NUS5 200 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
CIT-216ENST00000544872 IGLV10-54A0A075B6I4 117 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 NPSP0C0P6 89 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 MALP21145 153 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 S100A1P23297 94 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
CIT-216ENST00000544872 SEC11AP67812 179 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
CIT-216ENST00000544872 C2orf66Q6UXQ4 117 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 TEX43Q6ZNM6 134 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 Q6ZRN7 208 aaPredicted RBP6.33□□□□□ -1.4
CIT-216ENST00000544872 CBLN2Q8IUK8 224 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 BAALCQ8WXS3 180 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 PYGO1Q9Y3Y4 419 aa6.33□□□□□ -1.4
CIT-216ENST00000544872 IGLV5-52A0A0A0MRZ9 124 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.32□□□□□ -1.4
CIT-216ENST00000544872 TRAV13-1A0A0B4J241 112 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 IFITM10A6NMD0 228 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 KRTAP29-1A8MX34 341 aaPredicted RBP6.32□□□□□ -1.4
CIT-216ENST00000544872 APOMO95445 188 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 LINC00614P0C842 121 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 XCL1P47992 114 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 BAGE3Q86Y29 109 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 Q8N814 137 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 CHCHD10Q8WYQ3 142 aaPredicted RBP6.32□□□□□ -1.4
CIT-216ENST00000544872 TMEM141Q96I45 108 aa6.32□□□□□ -1.4
CIT-216ENST00000544872 RPL39P62891 51 aaKnown RBP6.31□□□□□ -1.4
CIT-216ENST00000544872 CD164L2Q6UWJ8 174 aa6.31□□□□□ -1.4
CIT-216ENST00000544872 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
CIT-216ENST00000544872 USP17L23D6RBM5 183 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.3□□□□□ -1.4
CIT-216ENST00000544872 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 COX7A2LO14548 114 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 LECT2O14960 151 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 GCSHP23434 173 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 ERASQ7Z444 233 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 TOMM6Q96B49 74 aa6.3□□□□□ -1.4
CIT-216ENST00000544872 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms