RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 DLEU1O43261 78 aa9.6□□□□□ -0.87
HCFC2-202ENST00000544223 RNF183Q96D59 192 aa9.6□□□□□ -0.87
HCFC2-202ENST00000544223 PRADC1Q9BSG0 188 aa9.6□□□□□ -0.87
HCFC2-202ENST00000544223 TRBV6-4A0A1B0GX49 114 aa9.59□□□□□ -0.87
HCFC2-202ENST00000544223 GAGE6Q13070 117 aa9.59□□□□□ -0.87
HCFC2-202ENST00000544223 HUWE1Q7Z6Z7 4374 aaKnown RBP9.59□□□□□ -0.87
HCFC2-202ENST00000544223 TRBV10-1A0A0K0K1A3 114 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 DAD1P61803 113 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 MRAPQ8TCY5 172 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 TRBV25-1A0A075B6N4 114 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 EGFEM1PQ0D2K5 195 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 DGAT2L7PQ6IED9 249 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 Q8N3U1 123 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
HCFC2-202ENST00000544223 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 CRYBA4P53673 196 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 TRAV26-1A0A087WT03 109 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 TRAV13-1A0A0B4J241 112 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 DAZ4Q86SG3 579 aaKnown RBP9.57□□□□□ -0.88
HCFC2-202ENST00000544223 PLEKHB2Q96CS7 222 aa9.57□□□□□ -0.88
HCFC2-202ENST00000544223 DAZ3Q9NR90 486 aaKnown RBP9.57□□□□□ -0.88
HCFC2-202ENST00000544223 F5H768 121 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 ZNF22P17026 224 aaPredicted RBP9.56□□□□□ -0.88
HCFC2-202ENST00000544223 COX6A2Q02221 97 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 VSIG2Q96IQ7 327 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 AMELXQ99217 191 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 TENM2Q9NT68 2774 aa9.56□□□□□ -0.88
HCFC2-202ENST00000544223 COL5A1-AS1Q5SY13 56 aa9.55□□□□□ -0.88
HCFC2-202ENST00000544223 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
HCFC2-202ENST00000544223 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
HCFC2-202ENST00000544223 PAX4O43316 350 aa9.55□□□□□ -0.88
HCFC2-202ENST00000544223 NPSP0C0P6 89 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 SPINK8P0C7L1 97 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 MIFP14174 115 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 SBSPONQ8IVN8 264 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 CHCHD5Q9BSY4 110 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 ZNF815PA8K554 130 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 E9PLD3 99 aa9.54□□□□□ -0.88
HCFC2-202ENST00000544223 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
HCFC2-202ENST00000544223 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 UBE2L6O14933 153 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 DEFB121Q5J5C9 76 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 AMMECR1LQ6DCA0 310 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 TMEM243Q9BU79 118 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 PRO0255Q9UI72 69 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 SPANXA1Q9NS26 97 aa9.53□□□□□ -0.88
HCFC2-202ENST00000544223 GCSHP23434 173 aa9.52□□□□□ -0.88
HCFC2-202ENST00000544223 SAMD5Q5TGI4 173 aa9.52□□□□□ -0.88
HCFC2-202ENST00000544223 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.88
HCFC2-202ENST00000544223 CDKN2A-AS1Q9UH64 79 aa9.52□□□□□ -0.88
HCFC2-202ENST00000544223 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.89
HCFC2-202ENST00000544223 SPART-AS1P0CW21 52 aa9.52□□□□□ -0.89
HCFC2-202ENST00000544223 NFE4Q86UQ8 179 aa9.52□□□□□ -0.89
HCFC2-202ENST00000544223 A0A0J9YWU9 116 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 FXYD2P54710 66 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 C12orf74Q32Q52 190 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 K7ERJ3 54 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 UBE2D1P51668 147 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 CDC42SE2Q9NRR3 84 aa9.51□□□□□ -0.89
HCFC2-202ENST00000544223 ATP5G1P05496 136 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 MRPS36P82909 103 aaKnown RBP9.5□□□□□ -0.89
HCFC2-202ENST00000544223 Q6ZTC4 211 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 OR5A1Q8NGJ0 315 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 RAB37Q96AX2 223 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
HCFC2-202ENST00000544223 J3QQQ9 107 aa9.49□□□□□ -0.89
HCFC2-202ENST00000544223 K7EIL1 84 aa9.49□□□□□ -0.89
HCFC2-202ENST00000544223 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
HCFC2-202ENST00000544223 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
HCFC2-202ENST00000544223 MEGF8Q7Z7M0 2845 aa9.49□□□□□ -0.89
HCFC2-202ENST00000544223 PAPPA-AS1Q5QFB9 102 aa9.49□□□□□ -0.89
HCFC2-202ENST00000544223 GEMIN7Q9H840 131 aaKnown RBP9.49□□□□□ -0.89
HCFC2-202ENST00000544223 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
HCFC2-202ENST00000544223 HERVK_113P61574 105 aa9.48□□□□□ -0.89
HCFC2-202ENST00000544223 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
HCFC2-202ENST00000544223 CBY1Q9Y3M2 126 aa9.48□□□□□ -0.89
HCFC2-202ENST00000544223 DNAH9Q9NYC9 4486 aa9.47□□□□□ -0.89
HCFC2-202ENST00000544223 PRKDCP78527 4128 aaKnown RBP9.47□□□□□ -0.89
HCFC2-202ENST00000544223 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
HCFC2-202ENST00000544223 TIMM21Q9BVV7 248 aa9.47□□□□□ -0.89
HCFC2-202ENST00000544223 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.89
HCFC2-202ENST00000544223 CIDEAO60543 219 aa9.46□□□□□ -0.89
HCFC2-202ENST00000544223 LGALS3P17931 250 aaKnown RBP9.46□□□□□ -0.89
HCFC2-202ENST00000544223 HSD52Q0P140 79 aa9.46□□□□□ -0.89
HCFC2-202ENST00000544223 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
HCFC2-202ENST00000544223 DNAH7Q8WXX0 4024 aa9.46□□□□□ -0.89
HCFC2-202ENST00000544223 SIVA1O15304 175 aa9.46□□□□□ -0.9
HCFC2-202ENST00000544223 ORAOV1Q8WV07 137 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 229.5 ms