RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SNHG12Q9BXW3 62 aa13.87□□□□□ -0.19
COPS7A-218ENST00000543939 TRBV6-8A0A0A6YYG3 113 aa13.86□□□□□ -0.19
COPS7A-218ENST00000543939 ATP6V0E2Q8NHE4 81 aa13.86□□□□□ -0.19
COPS7A-218ENST00000543939 C11orf68Q9H3H3 251 aaKnown RBP13.86□□□□□ -0.19
COPS7A-218ENST00000543939 H7C423 109 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 K7EIL1 84 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 M0R143 59 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 EREGO14944 169 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 DGAT2L7PQ6IED9 249 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 C2orf91Q6ZV80 131 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
COPS7A-218ENST00000543939 A0A0J9YXV3 536 aa13.84□□□□□ -0.19
COPS7A-218ENST00000543939 SMAGPQ0VAQ4 97 aa13.84□□□□□ -0.19
COPS7A-218ENST00000543939 E9PLD3 99 aa13.84□□□□□ -0.19
COPS7A-218ENST00000543939 F5H768 121 aa13.84□□□□□ -0.19
COPS7A-218ENST00000543939 C12orf74Q32Q52 190 aa13.84□□□□□ -0.19
COPS7A-218ENST00000543939 NOTCH1P46531 2555 aa13.83□□□□□ -0.19
COPS7A-218ENST00000543939 A0A0J9YY99 117 aa13.83□□□□□ -0.2
COPS7A-218ENST00000543939 UBE2L6O14933 153 aa13.83□□□□□ -0.2
COPS7A-218ENST00000543939 TTTY13Q9BZ97 58 aa13.83□□□□□ -0.2
COPS7A-218ENST00000543939 TMEM170BQ5T4T1 132 aa13.82□□□□□ -0.2
COPS7A-218ENST00000543939 C2orf88Q9BSF0 95 aa13.82□□□□□ -0.2
COPS7A-218ENST00000543939 TRAV26-1A0A087WT03 109 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 ZNF22P17026 224 aaPredicted RBP13.81□□□□□ -0.2
COPS7A-218ENST00000543939 SIVA1O15304 175 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 HTN3P15516 51 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 HERVK_113P61574 105 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 AMMECR1LQ6DCA0 310 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 OR5A1Q8NGJ0 315 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 CDC42SE2Q9NRR3 84 aa13.81□□□□□ -0.2
COPS7A-218ENST00000543939 TRAV8-6A0A0B4J262 113 aa13.8□□□□□ -0.2
COPS7A-218ENST00000543939 UBE2D1P51668 147 aa13.8□□□□□ -0.2
COPS7A-218ENST00000543939 MAPKAPK5-AS1Q8N8E1 139 aa13.8□□□□□ -0.2
COPS7A-218ENST00000543939 TINCRA0A1B0GVN0 87 aa13.79□□□□□ -0.2
COPS7A-218ENST00000543939 ZNF25P17030 456 aaPredicted RBP13.79□□□□□ -0.2
COPS7A-218ENST00000543939 GAGE6Q13070 117 aa13.79□□□□□ -0.2
COPS7A-218ENST00000543939 TMEM223A0PJW6 202 aa13.78□□□□□ -0.2
COPS7A-218ENST00000543939 LBHQ53QV2 105 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-218ENST00000543939 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
COPS7A-218ENST00000543939 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
COPS7A-218ENST00000543939 A0A096LPF7 62 aa13.78□□□□□ -0.2
COPS7A-218ENST00000543939 A0A0J9YWU9 116 aa13.78□□□□□ -0.2
COPS7A-218ENST00000543939 NBEAL1Q6ZS30 2694 aa13.77□□□□□ -0.2
COPS7A-218ENST00000543939 SPATA25Q9BR10 227 aa13.77□□□□□ -0.21
COPS7A-218ENST00000543939 TM2D3Q9BRN9 247 aa13.77□□□□□ -0.21
COPS7A-218ENST00000543939 HINT1P49773 126 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-218ENST00000543939 MRPL23Q16540 153 aaKnown RBP13.76□□□□□ -0.21
COPS7A-218ENST00000543939 DEFB121Q5J5C9 76 aa13.76□□□□□ -0.21
COPS7A-218ENST00000543939 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
COPS7A-218ENST00000543939 BATFQ16520 125 aa13.76□□□□□ -0.21
COPS7A-218ENST00000543939 TIRAPP58753 221 aa13.75□□□□□ -0.21
COPS7A-218ENST00000543939 MPV17L2Q567V2 206 aa13.75□□□□□ -0.21
COPS7A-218ENST00000543939 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
COPS7A-218ENST00000543939 MYMXA0A1B0GTQ4 84 aa13.74□□□□□ -0.21
COPS7A-218ENST00000543939 Q6ZTC4 211 aa13.74□□□□□ -0.21
COPS7A-218ENST00000543939 ICOSQ9Y6W8 199 aa13.74□□□□□ -0.21
COPS7A-218ENST00000543939 MGAM2Q2M2H8 2515 aa13.74□□□□□ -0.21
COPS7A-218ENST00000543939 TENM3Q9P273 2699 aa13.74□□□□□ -0.21
COPS7A-218ENST00000543939 IGLV4-60A0A075B6I1 120 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 SH2D6Q7Z4S9 175 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 GEMIN7Q9H840 131 aaKnown RBP13.73□□□□□ -0.21
COPS7A-218ENST00000543939 IGLV5-45A0A087WSX0 123 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 LEPROTO15243 131 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 TSPEAR-AS2P59090 65 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
COPS7A-218ENST00000543939 BVES-AS1Q5T3Y7 98 aa13.72□□□□□ -0.21
COPS7A-218ENST00000543939 MRAPQ8TCY5 172 aa13.72□□□□□ -0.21
COPS7A-218ENST00000543939 TRAV13-1A0A0B4J241 112 aa13.71□□□□□ -0.21
COPS7A-218ENST00000543939 H3BNG1 76 aa13.71□□□□□ -0.21
COPS7A-218ENST00000543939 SEC11AP67812 179 aa13.71□□□□□ -0.21
COPS7A-218ENST00000543939 COX6A2Q02221 97 aa13.71□□□□□ -0.21
COPS7A-218ENST00000543939 LINC00469Q8N7U9 141 aa13.71□□□□□ -0.21
COPS7A-218ENST00000543939 A0A1B0GUV1 79 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 ZNF815PA8K554 130 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 J3QQQ9 107 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 HERVK_113P63121 156 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
COPS7A-218ENST00000543939 HSD52Q0P140 79 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 LURAP1LQ8IV03 231 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 CDKN2A-AS1Q9UH64 79 aa13.7□□□□□ -0.22
COPS7A-218ENST00000543939 PLEKHB2Q96CS7 222 aa13.69□□□□□ -0.22
COPS7A-218ENST00000543939 IGHV3-64A0A075B6Q5 118 aa13.68□□□□□ -0.22
COPS7A-218ENST00000543939 RBX1P62877 108 aa13.68□□□□□ -0.22
COPS7A-218ENST00000543939 IGHV1-58A0A0C4DH39 117 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 TMEM262E9PQX1 116 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 LGALS3P17931 250 aaKnown RBP13.67□□□□□ -0.22
COPS7A-218ENST00000543939 COL5A1-AS1Q5SY13 56 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 TRAV8-3A0A0A6YYJ7 113 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 H3BRM9 83 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 IGHV3-30-3P0DP02 117 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 LELP1Q5T871 98 aa13.67□□□□□ -0.22
COPS7A-218ENST00000543939 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
COPS7A-218ENST00000543939 DEFB131BA0A096LNP1 70 aa13.64□□□□□ -0.23
COPS7A-218ENST00000543939 LYPD5Q6UWN5 251 aa13.64□□□□□ -0.23
COPS7A-218ENST00000543939 IGKV3OR2-268A0A0C4DH90 116 aa13.62□□□□□ -0.23
COPS7A-218ENST00000543939 TAL2Q16559 108 aa13.62□□□□□ -0.23
COPS7A-218ENST00000543939 SCGB1D4Q6XE38 83 aa13.62□□□□□ -0.23
COPS7A-218ENST00000543939 ORAOV1Q8WV07 137 aa13.62□□□□□ -0.23
COPS7A-218ENST00000543939 HUWE1Q7Z6Z7 4374 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms