RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 FAM223AQ8IWN6 122 aa1.64□□□□□ -2.15
GTF2H3-210ENST00000543005 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
GTF2H3-210ENST00000543005 OBSCN-AS1Q96MR7 158 aa1.64□□□□□ -2.15
GTF2H3-210ENST00000543005 HMGXB3Q12766 1538 aa1.64□□□□□ -2.15
GTF2H3-210ENST00000543005 ERICH3Q5RHP9 1530 aa1.64□□□□□ -2.15
GTF2H3-210ENST00000543005 SPAG17Q6Q759 2223 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 COX6CP09669 75 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 ETDBQ3ZM63 59 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 RABAC1Q9UI14 185 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 SNURFQ9Y675 71 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 SPCS1Q9Y6A9 102 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 MYH4Q9Y623 1939 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 PEAK1Q9H792 1746 aa1.63□□□□□ -2.15
GTF2H3-210ENST00000543005 TMEM14DPA8MWL7 114 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 CCL18P55774 89 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 SPAG11BQ08648 103 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 KLKP1Q107X0 134 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 SPAG11AQ6PDA7 123 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 ADAMTS12P58397 1594 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 CCDC141Q6ZP82 1450 aa1.62□□□□□ -2.15
GTF2H3-210ENST00000543005 PPRC1Q5VV67 1664 aaKnown RBP1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 INTS1Q8N201 2190 aaKnown RBP1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 TRBV25-1A0A075B6N4 114 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 FXYD1O00168 92 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 WFDC2Q14508 124 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 FAM74A4Q5TZK3 123 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 ST20Q9HBF5 79 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 V9GYH0 126 aa1.61□□□□□ -2.15
GTF2H3-210ENST00000543005 PDCD11Q14690 1871 aaKnown RBP1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 PI4KAP42356 2102 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 A0A1W2PPM0 123 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 EFNA4P52798 201 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 NMSQ5H8A3 153 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 V9GYV3 84 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 COL5A1P20908 1838 aaPredicted RBP1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
GTF2H3-210ENST00000543005 PRRC2BQ5JSZ5 2229 aaKnown RBP1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 KIF21AQ7Z4S6 1674 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 ADIRFQ15847 76 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 PMCHL1Q16048 86 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 Q86TA4 180 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 ZNF563Q8TA94 476 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 Q96NJ1 140 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 CCL19Q99731 98 aa1.59□□□□□ -2.15
GTF2H3-210ENST00000543005 ABCA8O94911 1581 aa1.59□□□□□ -2.16
GTF2H3-210ENST00000543005 BTAF1O14981 1849 aa1.59□□□□□ -2.16
GTF2H3-210ENST00000543005 ZNF236Q9UL36 1845 aa1.59□□□□□ -2.16
GTF2H3-210ENST00000543005 TMEM131LA2VDJ0 1609 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 IFT172Q9UG01 1749 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 LOC285095A0A1B0GVY8 99 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 FAM223BA6NKX1 122 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 BVES-AS1Q5T3Y7 98 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 Q6ZQY7 126 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 PPP1R1CQ8WVI7 109 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 AMELXQ99217 191 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 WFDC6Q9BQY6 131 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 TMEM14BQ9NUH8 114 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 R4GMQ9 66 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 ARL2-SNX15V9GYD0 113 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 LAMA4Q16363 1823 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 CFAP74Q9C0B2 1584 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 IQGAP3Q86VI3 1631 aa1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 ZC3H13Q5T200 1668 aaKnown RBP1.58□□□□□ -2.16
GTF2H3-210ENST00000543005 F2Z2F3 143 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 BCE1O60756 84 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 IGLC2P0DOY2 106 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 IGLC3P0DOY3 106 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 CAV3P56539 151 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 KRTAP6-3Q3LI67 103 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 TMEM170BQ5T4T1 132 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 LINC01600Q96MT4 127 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 CLIP1P30622 1438 aa1.57□□□□□ -2.16
GTF2H3-210ENST00000543005 MAP2P11137 1827 aaKnown RBP1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 IQSEC2Q5JU85 1478 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 NEXMIFQ5QGS0 1516 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 F8VRH5 84 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 F8WEM9 126 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 M0R135 149 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 SAA2P0DJI9 122 aaPredicted RBP1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 Q5BKY6 102 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 PSMG4Q5JS54 123 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 CFAP126Q5VTH2 177 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 MYO7BQ6PIF6 2116 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 ZMYM4Q5VZL5 1548 aa1.56□□□□□ -2.16
GTF2H3-210ENST00000543005 PTPN23Q9H3S7 1636 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 COL4A1P02462 1669 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 NUP188Q5SRE5 1749 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 MYO5CQ9NQX4 1742 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 LTN1O94822 1766 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 TRGV1A0A0A0MS02 117 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 SMIM31A0A1B0GVY4 71 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 ZNF815PA8K554 130 aa1.55□□□□□ -2.16
GTF2H3-210ENST00000543005 SNRPFP62306 86 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms