RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 GAGE13Q4V321 117 aa8.01□□□□□ -1.13
SRGAP1-205ENST00000542841 ERASQ7Z444 233 aa8.01□□□□□ -1.13
SRGAP1-205ENST00000542841 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
SRGAP1-205ENST00000542841 F5H768 121 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 H7C423 109 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 GYPEP15421 78 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 Q9UF83 564 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
SRGAP1-205ENST00000542841 SCGB1D1O95968 90 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 TNP2Q05952 138 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 PAPPA-AS1Q5QFB9 102 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 Q6ZN92 141 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 CHCHD7Q9BUK0 85 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 TIMM21Q9BVV7 248 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 SPANXA1Q9NS26 97 aa7.99□□□□□ -1.13
SRGAP1-205ENST00000542841 TRAV12-1A0A0B4J245 112 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 MRPL23Q16540 153 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 LINC00173Q6ZV60 143 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 ATP6V0E2Q8NHE4 81 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 VSIG2Q96IQ7 327 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 ICOSQ9Y6W8 199 aa7.98□□□□□ -1.13
SRGAP1-205ENST00000542841 TRBV25-1A0A075B6N4 114 aa7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 IGHV3-38A0A0C4DH36 116 aa7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 Q8N976 141 aa7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 C12orf57Q99622 126 aa7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 CSDC2Q9Y534 153 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-205ENST00000542841 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 PRSS1P07477 247 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 TIRAPP58753 221 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 S100A12P80511 92 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 TEX43Q6ZNM6 134 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 MRPL52Q86TS9 123 aaKnown RBP7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 TMEM243Q9BU79 118 aa7.96□□□□□ -1.14
SRGAP1-205ENST00000542841 HTN3P15516 51 aa7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 ZNF25P17030 456 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 PKIAP61925 76 aa7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 RPL39P62891 51 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 MRPS36P82909 103 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 BAALCQ8WXS3 180 aa7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
SRGAP1-205ENST00000542841 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 A0A087WX48 190 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 A0A0J9YY99 117 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 UBE2L6O14933 153 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 ODF1Q14990 250 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 PMVKQ15126 192 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 C6orf223Q8N319 242 aa7.94□□□□□ -1.14
SRGAP1-205ENST00000542841 A0A096LPF7 62 aa7.93□□□□□ -1.14
SRGAP1-205ENST00000542841 F8VRH5 84 aa7.93□□□□□ -1.14
SRGAP1-205ENST00000542841 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
SRGAP1-205ENST00000542841 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
SRGAP1-205ENST00000542841 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 NBDYA0A0U1RRE5 68 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 H0Y8G0 127 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 FGF6P10767 208 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 PLNP26678 52 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 AMELXQ99217 191 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 VCX2Q9H322 139 aa7.92□□□□□ -1.14
SRGAP1-205ENST00000542841 TRAV9-2A0A087WT02 112 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 EPM2AB3EWF7 344 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 DPM2O94777 84 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 LELP1Q5T871 98 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 AMMECR1LQ6DCA0 310 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 TMEM101Q96IK0 257 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 C2orf88Q9BSF0 95 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 VAMP8Q9BV40 100 aa7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 CHTOPQ9Y3Y2 248 aaKnown RBP7.91□□□□□ -1.14
SRGAP1-205ENST00000542841 A0A1B0GUV1 79 aa7.9□□□□□ -1.14
SRGAP1-205ENST00000542841 IGKCP01834 107 aa7.9□□□□□ -1.14
SRGAP1-205ENST00000542841 OR5A1Q8NGJ0 315 aa7.9□□□□□ -1.14
SRGAP1-205ENST00000542841 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
SRGAP1-205ENST00000542841 CST9LQ9H4G1 147 aa7.9□□□□□ -1.14
SRGAP1-205ENST00000542841 CDPF1Q6NVV7 123 aa7.89□□□□□ -1.15
SRGAP1-205ENST00000542841 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
SRGAP1-205ENST00000542841 INAFM2P0DMQ5 153 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 SEC11AP67812 179 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 NFE4Q86UQ8 179 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 CDC42SE2Q9NRR3 84 aa7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
SRGAP1-205ENST00000542841 TRAV8-6A0A0B4J262 113 aa7.87□□□□□ -1.15
SRGAP1-205ENST00000542841 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
SRGAP1-205ENST00000542841 CCL18P55774 89 aa7.87□□□□□ -1.15
SRGAP1-205ENST00000542841 LYPD5Q6UWN5 251 aa7.87□□□□□ -1.15
SRGAP1-205ENST00000542841 Q6ZUT4 128 aa7.87□□□□□ -1.15
SRGAP1-205ENST00000542841 IGLV4-69A0A075B6H9 119 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms