RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 J3QQQ9 107 aa10.02□□□□□ -0.81
LDB3-207ENST00000542786 TINCRA0A1B0GVN0 87 aa10.01□□□□□ -0.81
LDB3-207ENST00000542786 A0A1B0GWB2 263 aa10.01□□□□□ -0.81
LDB3-207ENST00000542786 UBE2D1P51668 147 aa10.01□□□□□ -0.81
LDB3-207ENST00000542786 SMIM9A6NGZ8 99 aa10□□□□□ -0.81
LDB3-207ENST00000542786 K7ERJ3 54 aa10□□□□□ -0.81
LDB3-207ENST00000542786 HIST1H4GQ99525 98 aa10□□□□□ -0.81
LDB3-207ENST00000542786 GTSF1LQ9H1H1 148 aa10□□□□□ -0.81
LDB3-207ENST00000542786 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
LDB3-207ENST00000542786 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
LDB3-207ENST00000542786 VAMP3Q15836 100 aa10□□□□□ -0.81
LDB3-207ENST00000542786 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
LDB3-207ENST00000542786 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
LDB3-207ENST00000542786 PTTG1IPP53801 180 aa9.98□□□□□ -0.81
LDB3-207ENST00000542786 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
LDB3-207ENST00000542786 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
LDB3-207ENST00000542786 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
LDB3-207ENST00000542786 NHP2Q9NX24 153 aaKnown RBP9.98□□□□□ -0.81
LDB3-207ENST00000542786 H3BUT2 72 aa9.97□□□□□ -0.81
LDB3-207ENST00000542786 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
LDB3-207ENST00000542786 TIRAPP58753 221 aa9.97□□□□□ -0.81
LDB3-207ENST00000542786 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
LDB3-207ENST00000542786 SCGB1D4Q6XE38 83 aa9.97□□□□□ -0.81
LDB3-207ENST00000542786 RAB37Q96AX2 223 aa9.97□□□□□ -0.81
LDB3-207ENST00000542786 NAA38Q9BRA0 125 aaKnown RBP9.97□□□□□ -0.81
LDB3-207ENST00000542786 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.81
LDB3-207ENST00000542786 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 KRTAP24-1Q3LI83 254 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 TMEM243Q9BU79 118 aa9.96□□□□□ -0.82
LDB3-207ENST00000542786 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 DEFB130BP0DP73 79 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 DEFB130AP0DP74 79 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 APOC4P55056 127 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
LDB3-207ENST00000542786 H7C423 109 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 COX6A2Q02221 97 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 DEFB135Q30KP9 77 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 LINC00242Q5T6M2 205 aa9.94□□□□□ -0.82
LDB3-207ENST00000542786 LYRM9A8MSI8 78 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 CDKN2A-AS1Q9UH64 79 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 K7EP34 96 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 SPINK8P0C7L1 97 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 LITAFQ99732 161 aa9.93□□□□□ -0.82
LDB3-207ENST00000542786 IGHV4-28A0A0C4DH34 117 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 IGLL5B9A064 214 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 SAMD5Q5TGI4 173 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 FAM222AQ5U5X8 452 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 Q8NAQ8 132 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
LDB3-207ENST00000542786 MAST4O15021 2626 aa9.92□□□□□ -0.82
LDB3-207ENST00000542786 TRBV6-8A0A0A6YYG3 113 aa9.91□□□□□ -0.82
LDB3-207ENST00000542786 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
LDB3-207ENST00000542786 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
LDB3-207ENST00000542786 SRSF9Q13242 221 aaKnown RBP eCLIP9.91□□□□□ -0.82
LDB3-207ENST00000542786 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
LDB3-207ENST00000542786 A8MZ25 164 aa9.9□□□□□ -0.82
LDB3-207ENST00000542786 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
LDB3-207ENST00000542786 HERVK_113P63121 156 aa9.9□□□□□ -0.82
LDB3-207ENST00000542786 ZFAND6Q6FIF0 208 aa9.9□□□□□ -0.82
LDB3-207ENST00000542786 F5H768 121 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 RNF183Q96D59 192 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 TMEM101Q96IK0 257 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 GAGE10A6NGK3 116 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 FABP2P12104 132 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 GYPEP15421 78 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 NDUFA12Q9UI09 145 aa9.89□□□□□ -0.83
LDB3-207ENST00000542786 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 A6NJY4 79 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 DEFB4AO15263 64 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 EIF4EBP3O60516 100 aaPredicted RBP9.88□□□□□ -0.83
LDB3-207ENST00000542786 KRTAP10-11P60412 298 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 GAGE6Q13070 117 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 PRO0255Q9UI72 69 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 SPCS1Q9Y6A9 102 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 NBEAL2Q6ZNJ1 2754 aa9.88□□□□□ -0.83
LDB3-207ENST00000542786 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 UBE2L6O14933 153 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 MIFP14174 115 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 GTF2H5Q6ZYL4 71 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 CELA1Q9UNI1 258 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
LDB3-207ENST00000542786 TRRAPQ9Y4A5 3859 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 NDUFA1O15239 70 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 CFC1BP0CG36 223 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 CFC1P0CG37 223 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 EGFEM1PQ0D2K5 195 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
LDB3-207ENST00000542786 TMEM238C9JI98 176 aa9.85□□□□□ -0.83
LDB3-207ENST00000542786 TIMM17BO60830 172 aa9.85□□□□□ -0.83
LDB3-207ENST00000542786 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms