RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PEAK1Q9H792 1746 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 ADAMTS12P58397 1594 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 TOP2BQ02880 1626 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 DOCK10Q96BY6 2186 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 IGKV2-29A2NJV5 120 aaPredicted RBP1.6□□□□□ -2.15
LEMD3-204ENST00000542032 EFNA4P52798 201 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 DEFB132Q7Z7B7 95 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 LINC00643Q86TS7 51 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 PPP1R1CQ8WVI7 109 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 LINC01600Q96MT4 127 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 TMEM14BQ9NUH8 114 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 R4GMQ9 66 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 ARL2-SNX15V9GYD0 113 aa1.6□□□□□ -2.15
LEMD3-204ENST00000542032 PDCD11Q14690 1871 aaKnown RBP1.59□□□□□ -2.15
LEMD3-204ENST00000542032 NRXN1Q9ULB1 1477 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 IGKV2-40A0A087WW87 121 aaPredicted RBP1.59□□□□□ -2.15
LEMD3-204ENST00000542032 NBDYA0A0U1RRE5 68 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 C10orf142B7Z368 130 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 IGKV2D-40P01614 121 aaPredicted RBP1.59□□□□□ -2.15
LEMD3-204ENST00000542032 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 FXYD3Q14802 87 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 PSMG4Q5JS54 123 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 CFAP126Q5VTH2 177 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 XAF1Q6GPH4 301 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 Q86TA4 180 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 C5orf56Q8N8D9 126 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 ZNF625Q96I27 306 aaPredicted RBP1.59□□□□□ -2.15
LEMD3-204ENST00000542032 V9GYV3 84 aa1.59□□□□□ -2.15
LEMD3-204ENST00000542032 CDK13Q14004 1512 aaKnown RBP1.59□□□□□ -2.16
LEMD3-204ENST00000542032 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.16
LEMD3-204ENST00000542032 MAP3K4Q9Y6R4 1608 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 ZC3H13Q5T200 1668 aaKnown RBP1.58□□□□□ -2.16
LEMD3-204ENST00000542032 RREB1Q92766 1687 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 TRGV2A0A075B6R0 118 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 LOC110117498A0A087WWA1 95 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 F8WEM9 126 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 SAA2P0DJI9 122 aaPredicted RBP1.58□□□□□ -2.16
LEMD3-204ENST00000542032 HMGN3Q15651 99 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 S100ZQ8WXG8 99 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 LINC00208Q96KT6 92 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 AFDNP55196 1824 aaKnown RBP1.58□□□□□ -2.16
LEMD3-204ENST00000542032 LRRC37A3O60309 1634 aa1.58□□□□□ -2.16
LEMD3-204ENST00000542032 NCOA2Q15596 1464 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 IQSEC2Q5JU85 1478 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 UGGT2Q9NYU1 1516 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 F8VRH5 84 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 FXYD1O00168 92 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 SMIM13P0DJ93 91 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 GDF5OSQ5U4N7 250 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 HEPN1Q6WQI6 88 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 PSENENQ9NZ42 101 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 ABCA4P78363 2273 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 MYO3AQ8NEV4 1616 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 UBR1Q8IWV7 1749 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 STRCP1A6NGW2 1772 aa1.57□□□□□ -2.16
LEMD3-204ENST00000542032 MRC1P22897 1456 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 GBF1Q92538 1859 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.56□□□□□ -2.16
LEMD3-204ENST00000542032 C7orf77A4D0Y5 90 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 FAM223BA6NKX1 122 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 IQCF6A8MYZ5 107 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 M0R135 149 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 HMGN2P05204 90 aaKnown RBP1.56□□□□□ -2.16
LEMD3-204ENST00000542032 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 CCL18P55774 89 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 AMELXQ99217 191 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 COL5A3P25940 1745 aaPredicted RBP1.56□□□□□ -2.16
LEMD3-204ENST00000542032 LTN1O94822 1766 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 SCN11AQ9UI33 1791 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 LAMA4Q16363 1823 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 BLMP54132 1417 aaPredicted RBP1.56□□□□□ -2.16
LEMD3-204ENST00000542032 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
LEMD3-204ENST00000542032 HMGXB3Q12766 1538 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 NEXMIFQ5QGS0 1516 aa1.56□□□□□ -2.16
LEMD3-204ENST00000542032 ADGRB2O60241 1585 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 PPRC1Q5VV67 1664 aaKnown RBP1.55□□□□□ -2.16
LEMD3-204ENST00000542032 KIF21AQ7Z4S6 1674 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 LOC285556D6RIA3 1793 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 BTAF1O14981 1849 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 TNRC6BQ9UPQ9 1833 aaKnown RBP1.55□□□□□ -2.16
LEMD3-204ENST00000542032 A0A087WTM6 91 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 CTXND1A0A1B0GTU2 59 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 HCRTO43612 131 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 LEPROTL1O95214 131 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 ARMS2P0C7Q2 107 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 BAGE2Q86Y30 109 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 WFDC6Q9BQY6 131 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 PRR15LQ9BU68 103 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 LINC01558Q9Y6Z2 57 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 TET1Q8NFU7 2136 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 ABCC1P33527 1531 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 EHBP1L1Q8N3D4 1523 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 PTPN23Q9H3S7 1636 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 MYOM1P52179 1685 aa1.55□□□□□ -2.16
LEMD3-204ENST00000542032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.54□□□□□ -2.16
LEMD3-204ENST00000542032 MYMXA0A1B0GTQ4 84 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 A0A1B0GWA3 101 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 M0R3E3 92 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms