RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
THBS3-211ENST00000541990 H7C423 109 aa6.71□□□□□ -1.34
THBS3-211ENST00000541990 BRI3O95415 125 aa6.71□□□□□ -1.34
THBS3-211ENST00000541990 CHCHD5Q9BSY4 110 aa6.71□□□□□ -1.34
THBS3-211ENST00000541990 TRBV27A0A0K0K1C4 114 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 LGALS9O00182 355 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 PRSS2P07478 247 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 MED14OSP0DP75 135 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 APRG1Q8IVJ8 170 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 PPP1R17O96001 155 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
THBS3-211ENST00000541990 C19orf54Q5BKX5 351 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 DAND5Q8N907 189 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
THBS3-211ENST00000541990 M0QY20 66 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 ICOSQ9Y6W8 199 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 KLLNB2CW77 178 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 RHPN1-AS1Q9BWJ2 59 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 Q9UF83 564 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 STAB1Q9NY15 2570 aa6.69□□□□□ -1.34
THBS3-211ENST00000541990 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
THBS3-211ENST00000541990 MEIG1Q5JSS6 88 aa6.68□□□□□ -1.34
THBS3-211ENST00000541990 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
THBS3-211ENST00000541990 SYNJ2BPP57105 145 aa6.68□□□□□ -1.34
THBS3-211ENST00000541990 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
THBS3-211ENST00000541990 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.67□□□□□ -1.34
THBS3-211ENST00000541990 SLURP1P55000 103 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 PROK1P58294 105 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 NSUN5P1Q3KNT7 163 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 FBN1P35555 2871 aaKnown RBP6.67□□□□□ -1.34
THBS3-211ENST00000541990 IGHV3-16A0A0C4DH30 117 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 TRBV6-5A0A0K0K1A5 114 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 PSMB8P28062 276 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
THBS3-211ENST00000541990 IGLV1-40P01703 118 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 CFHR3Q02985 330 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 NDUFA4O00483 81 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 PRM2P04554 102 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 COL6A5A8TX70 2615 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 I3L3M4 83 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 CD28P10747 220 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
THBS3-211ENST00000541990 LINC01587Q99440 93 aa6.65□□□□□ -1.34
THBS3-211ENST00000541990 TRGV11A0A075B6L2 103 aa6.65□□□□□ -1.35
THBS3-211ENST00000541990 FAM223BA6NKX1 122 aa6.65□□□□□ -1.35
THBS3-211ENST00000541990 RHOHQ15669 191 aa6.65□□□□□ -1.35
THBS3-211ENST00000541990 FAM223AQ8IWN6 122 aa6.65□□□□□ -1.35
THBS3-211ENST00000541990 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.35
THBS3-211ENST00000541990 A0A0J9YX75 114 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 LST1O00453 97 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 SPINK13Q1W4C9 94 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 NBEAL2Q6ZNJ1 2754 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 DCANP1Q8TF63 244 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 CITED2Q99967 270 aaPredicted RBP6.64□□□□□ -1.35
THBS3-211ENST00000541990 PPDPFQ9H3Y8 114 aa6.64□□□□□ -1.35
THBS3-211ENST00000541990 FAM236AA0A1B0GUQ0 79 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 FAM236BA0A1B0GV22 79 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 KNCNA6PVL3 124 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 HTN1P15515 57 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 TMEM61Q8N0U2 210 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
THBS3-211ENST00000541990 MIAQ16674 131 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 SPATA3Q8NHX4 192 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 LINC01006Q8NI28 216 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 TMEM126AQ9H061 195 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 IGHV1-58A0A0C4DH39 117 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 H3BT86 120 aa6.63□□□□□ -1.35
THBS3-211ENST00000541990 MRPL23Q16540 153 aaKnown RBP6.63□□□□□ -1.35
THBS3-211ENST00000541990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 MRPS36P82909 103 aaKnown RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 RBMY1A1P0DJD3 496 aaKnown RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 RBMY1CP0DJD4 496 aa6.62□□□□□ -1.35
THBS3-211ENST00000541990 RBMY1FQ15415 496 aaKnown RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 ZNF625Q96I27 306 aaPredicted RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 SPANXDQ9BXN6 97 aa6.62□□□□□ -1.35
THBS3-211ENST00000541990 SPANXCQ9NY87 97 aa6.62□□□□□ -1.35
THBS3-211ENST00000541990 KLK5Q9Y337 293 aaPredicted RBP6.62□□□□□ -1.35
THBS3-211ENST00000541990 IGHV3-38A0A0C4DH36 116 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 KRTAP10-3P60369 221 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 Q6ZSN1 163 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 DAZ1Q9NQZ3 744 aaKnown RBP6.61□□□□□ -1.35
THBS3-211ENST00000541990 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 Q8N2B8 174 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 USMG5Q96IX5 58 aa6.61□□□□□ -1.35
THBS3-211ENST00000541990 IGHV1OR15-1A0A075B7D0 117 aa6.6□□□□□ -1.35
THBS3-211ENST00000541990 COX6CP09669 75 aa6.6□□□□□ -1.35
THBS3-211ENST00000541990 DEFB121Q5J5C9 76 aa6.6□□□□□ -1.35
THBS3-211ENST00000541990 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
THBS3-211ENST00000541990 LOC107984640A0A0U1RRK4 108 aa6.59□□□□□ -1.36
THBS3-211ENST00000541990 FAM240AA0A1B0GVK7 77 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms