RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LINC00694P0DN24 101 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 GAGE2BQ13066 116 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 GAGE2EQ4V326 116 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 UBE2WQ96B02 151 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 GAGE2DQ9UEU5 116 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 APCP25054 2843 aa7.51□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE1-207ENST00000540998 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
CDC42SE1-207ENST00000540998 Q8N2B8 174 aa7.5□□□□□ -1.21
CDC42SE1-207ENST00000540998 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 MIAQ16674 131 aa7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 LINC01587Q99440 93 aa7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 NDUFV3P56181 108 aaKnown RBP7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
CDC42SE1-207ENST00000540998 B4DSR2 109 aa7.48□□□□□ -1.21
CDC42SE1-207ENST00000540998 TMEM101Q96IK0 257 aa7.48□□□□□ -1.21
CDC42SE1-207ENST00000540998 CITED2Q99967 270 aaPredicted RBP7.48□□□□□ -1.21
CDC42SE1-207ENST00000540998 Q9H8V8 135 aa7.48□□□□□ -1.21
CDC42SE1-207ENST00000540998 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
CDC42SE1-207ENST00000540998 SOSTDC1Q6X4U4 206 aa7.47□□□□□ -1.21
CDC42SE1-207ENST00000540998 IGKV3OR2-268A0A0C4DH90 116 aa7.47□□□□□ -1.21
CDC42SE1-207ENST00000540998 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 DGAT2L7PQ6IED9 249 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 ZNF702PQ9H963 129 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 PYGO1Q9Y3Y4 419 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 A0A1W2PRX2 142 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 PLA2G2AP14555 144 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
CDC42SE1-207ENST00000540998 C11orf72Q8NBR9 251 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 SPANXDQ9BXN6 97 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 SPANXCQ9NY87 97 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 USP24Q9UPU5 2620 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE5Q13069 117 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE6Q13070 117 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 CR1P17927 2039 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 LST1O00453 97 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 IFITM1P13164 125 aa7.45□□□□□ -1.22
CDC42SE1-207ENST00000540998 TRGV1A0A0A0MS02 117 aa7.44□□□□□ -1.22
CDC42SE1-207ENST00000540998 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
CDC42SE1-207ENST00000540998 MAP6D1Q9H9H5 199 aa7.44□□□□□ -1.22
CDC42SE1-207ENST00000540998 LINC00308Q8TCZ7 52 aa7.44□□□□□ -1.22
CDC42SE1-207ENST00000540998 TMEM89A2RUT3 159 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 COX6CP09669 75 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 ZNF415Q09FC8 603 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 VWFP04275 2813 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 RS1O15537 224 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 Q6ZTI0 123 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 FAM218AQ96MZ4 157 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 Q9HAA7 133 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 VPREB3Q9UKI3 123 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE4Q13068 117 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 NTM-AS1Q6ZSK4 140 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 WFDC10AQ9H1F0 79 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 SPANXA1Q9NS26 97 aa7.43□□□□□ -1.22
CDC42SE1-207ENST00000540998 HIVEP2P31629 2446 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 PRB1P04280 392 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 SMCR5Q8TEV8 140 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 KRTAP10-9P60411 292 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 DYNLRB2Q8TF09 96 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 Q96MF0 132 aa7.42□□□□□ -1.22
CDC42SE1-207ENST00000540998 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE7O76087 117 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 PRORYQ9H606 182 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 NDUFA1O15239 70 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 LINC01356Q8N9X3 169 aa7.41□□□□□ -1.22
CDC42SE1-207ENST00000540998 M0QXV9 152 aa7.4□□□□□ -1.22
CDC42SE1-207ENST00000540998 TOMM7Q9P0U1 55 aa7.4□□□□□ -1.22
CDC42SE1-207ENST00000540998 ODF3L2Q3SX64 289 aa7.4□□□□□ -1.23
CDC42SE1-207ENST00000540998 C9orf129Q5T035 196 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 C1orf158Q8N1D5 194 aa7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 SMIM20Q8N5G0 67 aa7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 ITPR2Q14571 2701 aa7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 H3BT86 120 aa7.39□□□□□ -1.23
CDC42SE1-207ENST00000540998 A0A096LNT2 108 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 NOP10Q9NPE3 64 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 FAM236AA0A1B0GUQ0 79 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 FAM236BA0A1B0GV22 79 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 INSP01308 110 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 YAE1D1Q9NRH1 226 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 C22orf24Q9Y442 160 aa7.38□□□□□ -1.23
CDC42SE1-207ENST00000540998 DEFB114Q30KQ6 69 aa7.37□□□□□ -1.23
CDC42SE1-207ENST00000540998 Q6YL49 198 aa7.37□□□□□ -1.23
CDC42SE1-207ENST00000540998 UBR5O95071 2799 aaPredicted RBP7.37□□□□□ -1.23
CDC42SE1-207ENST00000540998 IGLV5-39A0A0G2JS06 123 aa7.37□□□□□ -1.23
CDC42SE1-207ENST00000540998 CIRBPQ14011 172 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms