RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 Q6ZUT4 128 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 PYGO1Q9Y3Y4 419 aa6.7□□□□□ -1.34
PAAF1-209ENST00000540659 TRBV25-1A0A075B6N4 114 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 BATFQ16520 125 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 PCP2Q8IVA1 136 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 SBSPONQ8IVN8 264 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 ATP6V0E2Q8NHE4 81 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 TTTY13Q9BZ97 58 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 GTSF1LQ9H1H1 148 aa6.69□□□□□ -1.34
PAAF1-209ENST00000540659 TRAV26-1A0A087WT03 109 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 A0A0J9YWU9 116 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 A0A0J9YXV3 536 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 EREGO14944 169 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 FGF6P10767 208 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 GAGE6Q13070 117 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 AMMECR1LQ6DCA0 310 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 FAM104AQ969W3 186 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 C2orf88Q9BSF0 95 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 CHAC1Q9BUX1 264 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
PAAF1-209ENST00000540659 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 M0R143 59 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 NPSP0C0P6 89 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 C12orf74Q32Q52 190 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 AMELXQ99217 191 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 SNHG12Q9BXW3 62 aa6.67□□□□□ -1.34
PAAF1-209ENST00000540659 IGHV3-64A0A075B6Q5 118 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 TRBV6-8A0A0A6YYG3 113 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 H3BNG1 76 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 HINT1P49773 126 aaPredicted RBP6.66□□□□□ -1.34
PAAF1-209ENST00000540659 HERVK_113P61574 105 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 BOD1L2Q8IYS8 172 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
PAAF1-209ENST00000540659 IGKV3OR2-268A0A0C4DH90 116 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 H7C423 109 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
PAAF1-209ENST00000540659 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.34
PAAF1-209ENST00000540659 C2orf91Q6ZV80 131 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 NFE4Q86UQ8 179 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 MAPKAPK5-AS1Q8N8E1 139 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 OR5A1Q8NGJ0 315 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 TM2D3Q9BRN9 247 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 MRPS16Q9Y3D3 137 aaKnown RBP6.65□□□□□ -1.34
PAAF1-209ENST00000540659 DNAH9Q9NYC9 4486 aa6.65□□□□□ -1.34
PAAF1-209ENST00000540659 E9PLD3 99 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 TMEM262E9PQX1 116 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 UBE2D1P51668 147 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
PAAF1-209ENST00000540659 MRPL23Q16540 153 aaKnown RBP6.64□□□□□ -1.35
PAAF1-209ENST00000540659 Q6ZTC4 211 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 MRPL52Q86TS9 123 aaKnown RBP6.64□□□□□ -1.35
PAAF1-209ENST00000540659 C11orf45Q8TAV5 145 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 CDC42SE2Q9NRR3 84 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
PAAF1-209ENST00000540659 IGLV4-60A0A075B6I1 120 aa6.63□□□□□ -1.35
PAAF1-209ENST00000540659 TRAV13-1A0A0B4J241 112 aa6.63□□□□□ -1.35
PAAF1-209ENST00000540659 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
PAAF1-209ENST00000540659 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
PAAF1-209ENST00000540659 DLEU1O43261 78 aa6.63□□□□□ -1.35
PAAF1-209ENST00000540659 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
PAAF1-209ENST00000540659 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
PAAF1-209ENST00000540659 LGALS3P17931 250 aaKnown RBP6.62□□□□□ -1.35
PAAF1-209ENST00000540659 MPV17L2Q567V2 206 aa6.62□□□□□ -1.35
PAAF1-209ENST00000540659 LINC00469Q8N7U9 141 aa6.62□□□□□ -1.35
PAAF1-209ENST00000540659 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
PAAF1-209ENST00000540659 TRAV10A0A0B4J240 114 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 ZNF815PA8K554 130 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 LEPROTO15243 131 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 SIVA1O15304 175 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 SPINK8P0C7L1 97 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 ZNF25P17030 456 aaPredicted RBP6.61□□□□□ -1.35
PAAF1-209ENST00000540659 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 COX6A2Q02221 97 aa6.61□□□□□ -1.35
PAAF1-209ENST00000540659 DEFB131BA0A096LNP1 70 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 TRAV8-3A0A0A6YYJ7 113 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 J3QQQ9 107 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 SEC11AP67812 179 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 C15orf53Q8NAA6 179 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 STAB2Q8WWQ8 2551 aa6.6□□□□□ -1.35
PAAF1-209ENST00000540659 TIRAPP58753 221 aa6.59□□□□□ -1.35
PAAF1-209ENST00000540659 HERVK_113P63121 156 aa6.59□□□□□ -1.35
PAAF1-209ENST00000540659 BVES-AS1Q5T3Y7 98 aa6.59□□□□□ -1.35
PAAF1-209ENST00000540659 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
PAAF1-209ENST00000540659 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
PAAF1-209ENST00000540659 HUWE1Q7Z6Z7 4374 aaKnown RBP6.59□□□□□ -1.35
PAAF1-209ENST00000540659 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
PAAF1-209ENST00000540659 A0A1B0GV90 55 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms