RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FAM104AQ969W3 186 aa11.09□□□□□ -0.63
TRAF3-204ENST00000539721 VCX2Q9H322 139 aa11.09□□□□□ -0.63
TRAF3-204ENST00000539721 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 PKIAP61925 76 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 TEX43Q6ZNM6 134 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 A0A087WX48 190 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 RBX1P62877 108 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 ODF1Q14990 250 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 PMCHL2Q9BQD1 86 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 APLNQ9ULZ1 77 aa11.08□□□□□ -0.64
TRAF3-204ENST00000539721 IGLV4-60A0A075B6I1 120 aa11.07□□□□□ -0.64
TRAF3-204ENST00000539721 CCL18P55774 89 aa11.07□□□□□ -0.64
TRAF3-204ENST00000539721 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
TRAF3-204ENST00000539721 AMELXQ99217 191 aa11.07□□□□□ -0.64
TRAF3-204ENST00000539721 A0A1B0GUV1 79 aa11.06□□□□□ -0.64
TRAF3-204ENST00000539721 WFDC10BQ8IUB3 73 aa11.06□□□□□ -0.64
TRAF3-204ENST00000539721 CHTOPQ9Y3Y2 248 aaKnown RBP11.06□□□□□ -0.64
TRAF3-204ENST00000539721 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
TRAF3-204ENST00000539721 SMIM6P0DI80 62 aa11.05□□□□□ -0.64
TRAF3-204ENST00000539721 ZFAND6Q6FIF0 208 aa11.05□□□□□ -0.64
TRAF3-204ENST00000539721 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
TRAF3-204ENST00000539721 LINC00588Q9Y4M8 146 aa11.05□□□□□ -0.64
TRAF3-204ENST00000539721 Q8N3U1 123 aa11.05□□□□□ -0.64
TRAF3-204ENST00000539721 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
TRAF3-204ENST00000539721 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
TRAF3-204ENST00000539721 F8VRH5 84 aa11.04□□□□□ -0.64
TRAF3-204ENST00000539721 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
TRAF3-204ENST00000539721 TCTAP57738 103 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 IGHV3-30P01768 117 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 ANGP03950 147 aaKnown RBP11.03□□□□□ -0.64
TRAF3-204ENST00000539721 IGHV3-30-3P0DP02 117 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 IGHV3-30-5P0DP03 117 aa11.03□□□□□ -0.64
TRAF3-204ENST00000539721 DPM2O94777 84 aa11.02□□□□□ -0.65
TRAF3-204ENST00000539721 CDPF1Q6NVV7 123 aa11.02□□□□□ -0.65
TRAF3-204ENST00000539721 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.65
TRAF3-204ENST00000539721 IGKV3OR2-268A0A0C4DH90 116 aa11.01□□□□□ -0.65
TRAF3-204ENST00000539721 IGKCP01834 107 aa11.01□□□□□ -0.65
TRAF3-204ENST00000539721 IGLV4-69A0A075B6H9 119 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 PLNP26678 52 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 A0A0J9YXV3 536 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 UBE2D1P51668 147 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 LINC00269Q8N2A0 174 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 TGP01266 2768 aa11□□□□□ -0.65
TRAF3-204ENST00000539721 C12orf57Q99622 126 aa10.99□□□□□ -0.65
TRAF3-204ENST00000539721 UPK3BQ9BT76 320 aa10.99□□□□□ -0.65
TRAF3-204ENST00000539721 SIVA1O15304 175 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 LINC01556Q5JQF7 62 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 KLK12Q9UKR0 248 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 LINC00518Q8N0U6 118 aa10.98□□□□□ -0.65
TRAF3-204ENST00000539721 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
TRAF3-204ENST00000539721 REG3AQ06141 175 aa10.97□□□□□ -0.65
TRAF3-204ENST00000539721 STARD9Q9P2P6 4700 aa10.97□□□□□ -0.65
TRAF3-204ENST00000539721 LINC00959A0A1B0GUT2 108 aa10.96□□□□□ -0.65
TRAF3-204ENST00000539721 S100A12P80511 92 aa10.96□□□□□ -0.65
TRAF3-204ENST00000539721 VAMP8Q9BV40 100 aa10.96□□□□□ -0.65
TRAF3-204ENST00000539721 TRAV9-2A0A087WT02 112 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 hDV102S1A0JD36 115 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 SEC11AP67812 179 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 LINC00242Q5T6M2 205 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 GEMIN7Q9H840 131 aaKnown RBP10.95□□□□□ -0.66
TRAF3-204ENST00000539721 HSBP1L1C9JCN9 74 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 CRPP02741 224 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 SS18Q15532 418 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 Q9H8V8 135 aa10.95□□□□□ -0.66
TRAF3-204ENST00000539721 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
TRAF3-204ENST00000539721 HERVK_113P63121 156 aa10.94□□□□□ -0.66
TRAF3-204ENST00000539721 PRR34Q9NV39 138 aa10.94□□□□□ -0.66
TRAF3-204ENST00000539721 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
TRAF3-204ENST00000539721 PLECQ15149 4684 aaKnown RBP10.94□□□□□ -0.66
TRAF3-204ENST00000539721 STPG4Q8N801 248 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 CCL25O15444 150 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 COX6A2Q02221 97 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 ENHOQ6UWT2 76 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 LINC00469Q8N7U9 141 aa10.93□□□□□ -0.66
TRAF3-204ENST00000539721 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
TRAF3-204ENST00000539721 IGLV10-54A0A075B6I4 117 aa10.91□□□□□ -0.66
TRAF3-204ENST00000539721 IGLV5-45A0A087WSX0 123 aa10.9□□□□□ -0.66
TRAF3-204ENST00000539721 C3orf84H3BNL1 204 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms