RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 LRCOL1A6NCL2 159 aa8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 COX11Q9Y6N1 276 aa8.44□□□□□ -1.06
TSPAN9-207ENST00000539631 DYNC1H1Q14204 4646 aaKnown RBP8.43□□□□□ -1.06
TSPAN9-207ENST00000539631 SCO1O75880 301 aa8.43□□□□□ -1.06
TSPAN9-207ENST00000539631 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
TSPAN9-207ENST00000539631 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
TSPAN9-207ENST00000539631 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
TSPAN9-207ENST00000539631 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 TRAV8-4A0A0B4J246 113 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 SMAGPQ0VAQ4 97 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 WFDC2Q14508 124 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 ORMDL2Q53FV1 153 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 KRTAP26-1Q6PEX3 210 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 ZNF664Q8N3J9 261 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 BAALCQ8WXS3 180 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 TIMM21Q9BVV7 248 aa8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
TSPAN9-207ENST00000539631 K7EMI3 77 aa8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 EREGO14944 169 aa8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 LECT2O14960 151 aa8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 Q6ZUT4 128 aa8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
TSPAN9-207ENST00000539631 COLCA2A8K830 154 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 FUSP35637 526 aaKnown RBP eCLIP8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 C2orf66Q6UXQ4 117 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 FAM104AQ969W3 186 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 OPRPNQ99935 248 aaPredicted RBP8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 SPANXA1Q9NS26 97 aa8.4□□□□□ -1.06
TSPAN9-207ENST00000539631 RYR1P21817 5038 aa8.39□□□□□ -1.07
TSPAN9-207ENST00000539631 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
TSPAN9-207ENST00000539631 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
TSPAN9-207ENST00000539631 CYSLTR1Q9Y271 337 aa8.39□□□□□ -1.07
TSPAN9-207ENST00000539631 DNAH5Q8TE73 4624 aa8.39□□□□□ -1.07
TSPAN9-207ENST00000539631 GAGE12HA6NDE8 117 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 TRGC2P03986 189 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 Q8N814 137 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 CHCHD10Q8WYQ3 142 aaPredicted RBP8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
TSPAN9-207ENST00000539631 SS18Q15532 418 aa8.37□□□□□ -1.07
TSPAN9-207ENST00000539631 IGLV4-3A0A075B6K6 122 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 USP17L23D6RBM5 183 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 CCL25O15444 150 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 ATP6V1G1O75348 118 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 LINC00614P0C842 121 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 TOMM6Q96B49 74 aa8.36□□□□□ -1.07
TSPAN9-207ENST00000539631 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 IGIPA6NJ69 53 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 G0S2P27469 103 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 XCL1P47992 114 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 FOXI1Q12951 378 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
TSPAN9-207ENST00000539631 S100A1P23297 94 aa8.34□□□□□ -1.07
TSPAN9-207ENST00000539631 TMEM141Q96I45 108 aa8.34□□□□□ -1.07
TSPAN9-207ENST00000539631 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
TSPAN9-207ENST00000539631 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 C1orf196B1AJZ1 125 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 RAB5BP61020 215 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 SCGB3A1Q96QR1 104 aa8.33□□□□□ -1.08
TSPAN9-207ENST00000539631 A0A096LNJ9 63 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 PRSS1P07477 247 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 NPSP0C0P6 89 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 CDPF1Q6NVV7 123 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 ERASQ7Z444 233 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 AMELXQ99217 191 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
TSPAN9-207ENST00000539631 Q6ZN92 141 aa8.31□□□□□ -1.08
TSPAN9-207ENST00000539631 C15orf56Q8N910 161 aa8.31□□□□□ -1.08
TSPAN9-207ENST00000539631 VCX2Q9H322 139 aa8.31□□□□□ -1.08
TSPAN9-207ENST00000539631 LRP1BQ9NZR2 4599 aa8.31□□□□□ -1.08
TSPAN9-207ENST00000539631 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 HBDP02042 147 aa8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 UBE2D1P51668 147 aa8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
TSPAN9-207ENST00000539631 GCSHP23434 173 aa8.29□□□□□ -1.08
TSPAN9-207ENST00000539631 HIGD2BQ4VC39 106 aa8.29□□□□□ -1.08
TSPAN9-207ENST00000539631 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
TSPAN9-207ENST00000539631 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms