RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 TEX15Q9BXT5 2789 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 USP9XQ93008 2570 aaPredicted RBP6.99□□□□□ -1.29
CDH13-204ENST00000539548 TRAV4A0A0B4J268 109 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 FSHBP01225 129 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 Q6ZSV7 163 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 LINC01587Q99440 93 aa6.99□□□□□ -1.29
CDH13-204ENST00000539548 CRLF1O75462 422 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
CDH13-204ENST00000539548 NPC2P61916 151 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
CDH13-204ENST00000539548 CLEC2BQ92478 149 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 PEMTQ9UBM1 199 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 IGHV3-38A0A0C4DH36 116 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 MRPL23Q16540 153 aaKnown RBP6.98□□□□□ -1.29
CDH13-204ENST00000539548 C18orf65Q6ZTR6 163 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 MAP6D1Q9H9H5 199 aa6.98□□□□□ -1.29
CDH13-204ENST00000539548 UNC79Q9P2D8 2635 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 IGLV5-39A0A0G2JS06 123 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
CDH13-204ENST00000539548 DEFB136Q30KP8 78 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 DGAT2L7PQ6IED9 249 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
CDH13-204ENST00000539548 C15orf53Q8NAA6 179 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 NRGNQ92686 78 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 CITED2Q99967 270 aaPredicted RBP6.97□□□□□ -1.29
CDH13-204ENST00000539548 MYO9AB2RTY4 2548 aa6.97□□□□□ -1.29
CDH13-204ENST00000539548 INSP01308 110 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 HERVK_113P63121 156 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 COX6A2Q02221 97 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 GAGE5Q13069 117 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 GAGE6Q13070 117 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 VPS13CQ709C8 3753 aa6.96□□□□□ -1.29
CDH13-204ENST00000539548 IGHV3OR16-12A0A075B7B8 117 aa6.96□□□□□ -1.3
CDH13-204ENST00000539548 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.3
CDH13-204ENST00000539548 Q8N2B8 174 aa6.96□□□□□ -1.3
CDH13-204ENST00000539548 LINC00308Q8TCZ7 52 aa6.96□□□□□ -1.3
CDH13-204ENST00000539548 SPG11Q96JI7 2443 aa6.96□□□□□ -1.3
CDH13-204ENST00000539548 TTC32Q5I0X7 151 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 DAND5Q8N907 189 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 DEFB114Q30KQ6 69 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 C4orf3Q8WVX3 66 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 COPS9Q8WXC6 57 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 Q9H8V8 135 aa6.95□□□□□ -1.3
CDH13-204ENST00000539548 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
CDH13-204ENST00000539548 MAPK1IP1LQ8NDC0 245 aa6.94□□□□□ -1.3
CDH13-204ENST00000539548 DYNLRB2Q8TF09 96 aa6.94□□□□□ -1.3
CDH13-204ENST00000539548 USP9YO00507 2555 aaPredicted RBP6.94□□□□□ -1.3
CDH13-204ENST00000539548 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
CDH13-204ENST00000539548 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
CDH13-204ENST00000539548 IL17DQ8TAD2 202 aa6.93□□□□□ -1.3
CDH13-204ENST00000539548 COX7A2LO14548 114 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 IGHV4-31P0DP07 118 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 CENPEQ02224 2701 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 CREBBPQ92793 2442 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 TRBV10-1A0A0K0K1A3 114 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE7O76087 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE12FP0CL80 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE12GP0CL81 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE12IP0CL82 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 LINC00694P0DN24 101 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 RPL36AP83881 106 aaKnown RBP6.92□□□□□ -1.3
CDH13-204ENST00000539548 GAGE4Q13068 117 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 SOSTDC1Q6X4U4 206 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 C1orf158Q8N1D5 194 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
CDH13-204ENST00000539548 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
CDH13-204ENST00000539548 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
CDH13-204ENST00000539548 UTP20O75691 2785 aaKnown RBP6.91□□□□□ -1.3
CDH13-204ENST00000539548 DAZ2Q13117 558 aaKnown RBP6.91□□□□□ -1.3
CDH13-204ENST00000539548 NTM-AS1Q6ZSK4 140 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 DAZ4Q86SG3 579 aaKnown RBP6.91□□□□□ -1.3
CDH13-204ENST00000539548 DAZ3Q9NR90 486 aaKnown RBP6.91□□□□□ -1.3
CDH13-204ENST00000539548 NBPF19A0A087WUL8 3843 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 DOPEY1Q5JWR5 2465 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 TRGV1A0A0A0MS02 117 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 TRAV25A0A0B4J276 109 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 B5MCH6 92 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 F5H768 121 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 ACYP1P07311 99 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 HERV-K104P63124 156 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 CDC42SE2Q9NRR3 84 aa6.91□□□□□ -1.3
CDH13-204ENST00000539548 CR1P17927 2039 aa6.9□□□□□ -1.3
CDH13-204ENST00000539548 K7EQD1 137 aa6.9□□□□□ -1.3
CDH13-204ENST00000539548 NDUFA7O95182 113 aa6.9□□□□□ -1.3
CDH13-204ENST00000539548 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
CDH13-204ENST00000539548 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
CDH13-204ENST00000539548 CRYBG3Q68DQ2 2970 aa6.9□□□□□ -1.31
CDH13-204ENST00000539548 MAP1AP78559 2803 aaPredicted RBP6.89□□□□□ -1.31
CDH13-204ENST00000539548 CELSR2Q9HCU4 2923 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 TRAV13-1A0A0B4J241 112 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 TRBV7-7A0A0K0K1E9 115 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 A0A0U1RRA0 63 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 TRACP01848 142 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 MEIG1Q5JSS6 88 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 STHQ8IWL8 128 aa6.89□□□□□ -1.31
CDH13-204ENST00000539548 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms